Gene Dred_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1580 
Symbol 
ID4958373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1717356 
End bp1718693 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content44% 
IMG OID640180753 
Producthypothetical protein 
Protein accessionYP_001112933 
Protein GI134299437 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0951178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATACTGG TAAACTTGGT AATTATGATT ATACTGATCA CTGCCACTGC CTTTTTTGTT 
ACTACAGAAT TTGCCATGGT GAAGGTGAGG GATTCCCGCA TTGAGCAACT AATTCAGGAG
GGAAATAAAC GGGCAGAGTC TGTAAGAAAA GTTATTTACA ACCTGGACGG CTACCTTTCT
GCCTGCCAGT TGGGTATTAC CCTTACTGCC TTAGGGCTGG GTTGGATTGG GGAACCTGCT
GTGTCCAATG TCATTGAGCC GGTTATTCAT TACCTGGGTT TGCCCGTTGC TGTGACACAA
GGGCTGTCCT TTATCATAGG TTTTGCCACT ATCACTTTCT TACATGTGGT GGTTGGAGAA
CTTGCGCCAA AAACCCTGGC TATTCAAAGG GCTGAACAAG TGACCCTTGC AGTTTCATCG
ACCTTGATCT GGTTTTATAA AGTCATGTAC CCGGCCATTT GGCTCTTAAA TGGTTCTGCC
AGGTATATCA TTAAGCTTAT CGGTCTACAG GTAGTTTCCG AGCACCACCA AATTCATTCC
GAAGAGGAAA TTCGCATGAT TTTGTTGCAG AGTCATAAGG GAGGTGAAAT TACACAGACT
GAGTTGCAAT TGGCCAGAAA CTCGTTGCAT TTTGCTGACC GGGTGGCCGC AGAAATCATG
GTTCCTCGCC CCGACATGGT CTGCTTATAT ACCAATTTAA GCTGGGAAGA AAATTTAAAA
ATTATCACCG AGGAGAAATA TGCCCGCTAC CCGGTGTGCG ATGGTGACAA AGACTATATT
ATTGGCTTTG TTAATACTAA AGATTTGTGC TTTAGCGGTC TAACAGATTT AAATATGCTT
AATTTGGAAG GCTTTTTGAA ACAGGCCCTG CGTAAAGCTA TGGTGGTTAC AGAGTTAACA
CCAATTGATG AGATTTTAAA GAAAATGCAG AAAAACCGAC TGCAAATGGC TATTGTACAG
GATGAATATG GCGGCACTGC AGGGCTTTTA ACCCTGGAAG ATATTTTAGA GGAGATTGTG
GGAGAAATTC AGGACGAGCA CGATGAGGAG CGGCAACTTA TTGAGTCCCT GGGCGGTAAC
AGGTACTCAC TGGATGCCAG GCTGCCCATT GCGGATTTCA ACTTAGAATT TGATTTAGAC
CTTAAGGCAA AGGGTGTCTA TACTCTAGCC GGTTGGTTCC AGGAGGAGTC CCACCGAACA
CCGGAGAAGG GTCAGACCGT TCGTTATAAA AACTTACAGT TTAGCATTTC TGAAATTGAT
AAAAATACCA TTAGGCGCAT CGAGATGACT TTTTTCAGGA ACCACGATCA TAGTAACTCA
GGGTTTTCGG AGTTTTGA
 
Protein sequence
MILVNLVIMI ILITATAFFV TTEFAMVKVR DSRIEQLIQE GNKRAESVRK VIYNLDGYLS 
ACQLGITLTA LGLGWIGEPA VSNVIEPVIH YLGLPVAVTQ GLSFIIGFAT ITFLHVVVGE
LAPKTLAIQR AEQVTLAVSS TLIWFYKVMY PAIWLLNGSA RYIIKLIGLQ VVSEHHQIHS
EEEIRMILLQ SHKGGEITQT ELQLARNSLH FADRVAAEIM VPRPDMVCLY TNLSWEENLK
IITEEKYARY PVCDGDKDYI IGFVNTKDLC FSGLTDLNML NLEGFLKQAL RKAMVVTELT
PIDEILKKMQ KNRLQMAIVQ DEYGGTAGLL TLEDILEEIV GEIQDEHDEE RQLIESLGGN
RYSLDARLPI ADFNLEFDLD LKAKGVYTLA GWFQEESHRT PEKGQTVRYK NLQFSISEID
KNTIRRIEMT FFRNHDHSNS GFSEF