Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1580 |
Symbol | |
ID | 4958373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1717356 |
End bp | 1718693 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640180753 |
Product | hypothetical protein |
Protein accession | YP_001112933 |
Protein GI | 134299437 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0951178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATACTGG TAAACTTGGT AATTATGATT ATACTGATCA CTGCCACTGC CTTTTTTGTT ACTACAGAAT TTGCCATGGT GAAGGTGAGG GATTCCCGCA TTGAGCAACT AATTCAGGAG GGAAATAAAC GGGCAGAGTC TGTAAGAAAA GTTATTTACA ACCTGGACGG CTACCTTTCT GCCTGCCAGT TGGGTATTAC CCTTACTGCC TTAGGGCTGG GTTGGATTGG GGAACCTGCT GTGTCCAATG TCATTGAGCC GGTTATTCAT TACCTGGGTT TGCCCGTTGC TGTGACACAA GGGCTGTCCT TTATCATAGG TTTTGCCACT ATCACTTTCT TACATGTGGT GGTTGGAGAA CTTGCGCCAA AAACCCTGGC TATTCAAAGG GCTGAACAAG TGACCCTTGC AGTTTCATCG ACCTTGATCT GGTTTTATAA AGTCATGTAC CCGGCCATTT GGCTCTTAAA TGGTTCTGCC AGGTATATCA TTAAGCTTAT CGGTCTACAG GTAGTTTCCG AGCACCACCA AATTCATTCC GAAGAGGAAA TTCGCATGAT TTTGTTGCAG AGTCATAAGG GAGGTGAAAT TACACAGACT GAGTTGCAAT TGGCCAGAAA CTCGTTGCAT TTTGCTGACC GGGTGGCCGC AGAAATCATG GTTCCTCGCC CCGACATGGT CTGCTTATAT ACCAATTTAA GCTGGGAAGA AAATTTAAAA ATTATCACCG AGGAGAAATA TGCCCGCTAC CCGGTGTGCG ATGGTGACAA AGACTATATT ATTGGCTTTG TTAATACTAA AGATTTGTGC TTTAGCGGTC TAACAGATTT AAATATGCTT AATTTGGAAG GCTTTTTGAA ACAGGCCCTG CGTAAAGCTA TGGTGGTTAC AGAGTTAACA CCAATTGATG AGATTTTAAA GAAAATGCAG AAAAACCGAC TGCAAATGGC TATTGTACAG GATGAATATG GCGGCACTGC AGGGCTTTTA ACCCTGGAAG ATATTTTAGA GGAGATTGTG GGAGAAATTC AGGACGAGCA CGATGAGGAG CGGCAACTTA TTGAGTCCCT GGGCGGTAAC AGGTACTCAC TGGATGCCAG GCTGCCCATT GCGGATTTCA ACTTAGAATT TGATTTAGAC CTTAAGGCAA AGGGTGTCTA TACTCTAGCC GGTTGGTTCC AGGAGGAGTC CCACCGAACA CCGGAGAAGG GTCAGACCGT TCGTTATAAA AACTTACAGT TTAGCATTTC TGAAATTGAT AAAAATACCA TTAGGCGCAT CGAGATGACT TTTTTCAGGA ACCACGATCA TAGTAACTCA GGGTTTTCGG AGTTTTGA
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Protein sequence | MILVNLVIMI ILITATAFFV TTEFAMVKVR DSRIEQLIQE GNKRAESVRK VIYNLDGYLS ACQLGITLTA LGLGWIGEPA VSNVIEPVIH YLGLPVAVTQ GLSFIIGFAT ITFLHVVVGE LAPKTLAIQR AEQVTLAVSS TLIWFYKVMY PAIWLLNGSA RYIIKLIGLQ VVSEHHQIHS EEEIRMILLQ SHKGGEITQT ELQLARNSLH FADRVAAEIM VPRPDMVCLY TNLSWEENLK IITEEKYARY PVCDGDKDYI IGFVNTKDLC FSGLTDLNML NLEGFLKQAL RKAMVVTELT PIDEILKKMQ KNRLQMAIVQ DEYGGTAGLL TLEDILEEIV GEIQDEHDEE RQLIESLGGN RYSLDARLPI ADFNLEFDLD LKAKGVYTLA GWFQEESHRT PEKGQTVRYK NLQFSISEID KNTIRRIEMT FFRNHDHSNS GFSEF
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