Gene Dred_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1573 
Symbol 
ID4958316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1711787 
End bp1712767 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content42% 
IMG OID640180746 
Productextracellular solute-binding protein 
Protein accessionYP_001112926 
Protein GI134299430 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.817202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TTATTACACT AGTCGCTTTG TTTGTTCTAA CAACCTTGGT ACTAGCGGGA 
TGCAGTGGGC AGCAAAAACA ACCCGCCCCC AAGGACCAAG TAGCTCAAAC ACAGAAGGTT
GAAAATATAA AAATATCCTA CGTAAAACTT CCATTAAATG TCCCTTCCAT TGTAGAAAAG
AAATTAAATT TATTTGAAAA AGAATTTGAA AAGGATGGCA TCCAAGTGTC TTTTCCGGAA
ATCACGGAAG GTCCGAAAAT GACAGCAGCC CTTGCTTCGG GATCTTTGGA TTTCTGCAAT
GCCCTAGGTG GAACCTCTGC CATTCTAGCA GCAGCCAACG GCGTGGATCT GAAAATTATT
GGCATGTATA GCAGGGCTCC CAAGGCTTTT ACCATTATGA CTAAAGATCC TGCTATTCAA
TCAGTGGCTG ACCTAAAGGG TAAAAAAGTT GCTGGACCTA AGGGAACAAT TCTTCACCAG
TTGCTTTTGG CCAGTCTAAG TAAAGATAAC CTTAAATCAG CAGATGTAAA TTTTATTAAT
ATGCCTATAC CTTCCGCCGT GTCTGCCATG CTTTCTGGCA ACGTCGATGC CACCCTTGTT
GCCGGACCGG CAGTACCTAA GGCACTGGAA AGCGGAGCAC GAATACTTAC CACCGGGGAA
GGTCTTTTGG ATGCAACTAT TGTCATAGCC GTATCAGGTA AATTTTATAA AGAACACCCT
GATCTGGTAC AGCGCTATAT GAAGGTACAT GATGCTAGTA TCCAATATAT GCAAAAAAAT
ACCGATGAGG TTTATGCAAT GGCAGCCGCT GAAACCGGGA TTTCTCTGGA AGATGTAAAA
AAGATGTACG ACTGGTATGA CTTTACCCCC TCCATCACCG ACCAGGATAT GGAAGATCTT
GAGAAAACCC AAGAATTTTT GCTGCAAAAC GAAATGTTAA CTAATAAAAT CAACCTGAAG
GATCTCATTG TGACACCGTA A
 
Protein sequence
MKRIITLVAL FVLTTLVLAG CSGQQKQPAP KDQVAQTQKV ENIKISYVKL PLNVPSIVEK 
KLNLFEKEFE KDGIQVSFPE ITEGPKMTAA LASGSLDFCN ALGGTSAILA AANGVDLKII
GMYSRAPKAF TIMTKDPAIQ SVADLKGKKV AGPKGTILHQ LLLASLSKDN LKSADVNFIN
MPIPSAVSAM LSGNVDATLV AGPAVPKALE SGARILTTGE GLLDATIVIA VSGKFYKEHP
DLVQRYMKVH DASIQYMQKN TDEVYAMAAA ETGISLEDVK KMYDWYDFTP SITDQDMEDL
EKTQEFLLQN EMLTNKINLK DLIVTP