Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1573 |
Symbol | |
ID | 4958316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 1711787 |
End bp | 1712767 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640180746 |
Product | extracellular solute-binding protein |
Protein accession | YP_001112926 |
Protein GI | 134299430 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.817202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA TTATTACACT AGTCGCTTTG TTTGTTCTAA CAACCTTGGT ACTAGCGGGA TGCAGTGGGC AGCAAAAACA ACCCGCCCCC AAGGACCAAG TAGCTCAAAC ACAGAAGGTT GAAAATATAA AAATATCCTA CGTAAAACTT CCATTAAATG TCCCTTCCAT TGTAGAAAAG AAATTAAATT TATTTGAAAA AGAATTTGAA AAGGATGGCA TCCAAGTGTC TTTTCCGGAA ATCACGGAAG GTCCGAAAAT GACAGCAGCC CTTGCTTCGG GATCTTTGGA TTTCTGCAAT GCCCTAGGTG GAACCTCTGC CATTCTAGCA GCAGCCAACG GCGTGGATCT GAAAATTATT GGCATGTATA GCAGGGCTCC CAAGGCTTTT ACCATTATGA CTAAAGATCC TGCTATTCAA TCAGTGGCTG ACCTAAAGGG TAAAAAAGTT GCTGGACCTA AGGGAACAAT TCTTCACCAG TTGCTTTTGG CCAGTCTAAG TAAAGATAAC CTTAAATCAG CAGATGTAAA TTTTATTAAT ATGCCTATAC CTTCCGCCGT GTCTGCCATG CTTTCTGGCA ACGTCGATGC CACCCTTGTT GCCGGACCGG CAGTACCTAA GGCACTGGAA AGCGGAGCAC GAATACTTAC CACCGGGGAA GGTCTTTTGG ATGCAACTAT TGTCATAGCC GTATCAGGTA AATTTTATAA AGAACACCCT GATCTGGTAC AGCGCTATAT GAAGGTACAT GATGCTAGTA TCCAATATAT GCAAAAAAAT ACCGATGAGG TTTATGCAAT GGCAGCCGCT GAAACCGGGA TTTCTCTGGA AGATGTAAAA AAGATGTACG ACTGGTATGA CTTTACCCCC TCCATCACCG ACCAGGATAT GGAAGATCTT GAGAAAACCC AAGAATTTTT GCTGCAAAAC GAAATGTTAA CTAATAAAAT CAACCTGAAG GATCTCATTG TGACACCGTA A
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Protein sequence | MKRIITLVAL FVLTTLVLAG CSGQQKQPAP KDQVAQTQKV ENIKISYVKL PLNVPSIVEK KLNLFEKEFE KDGIQVSFPE ITEGPKMTAA LASGSLDFCN ALGGTSAILA AANGVDLKII GMYSRAPKAF TIMTKDPAIQ SVADLKGKKV AGPKGTILHQ LLLASLSKDN LKSADVNFIN MPIPSAVSAM LSGNVDATLV AGPAVPKALE SGARILTTGE GLLDATIVIA VSGKFYKEHP DLVQRYMKVH DASIQYMQKN TDEVYAMAAA ETGISLEDVK KMYDWYDFTP SITDQDMEDL EKTQEFLLQN EMLTNKINLK DLIVTP
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