Gene Dred_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1569 
Symbol 
ID4958256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1707965 
End bp1708777 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content45% 
IMG OID640180742 
Producthypothetical protein 
Protein accessionYP_001112922 
Protein GI134299426 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAA TATTGTTGTC CCTTATGGCC ATGTTGTTGG CGGTGGGGAT CATAGGATGC 
GGTGGGGGTA CGGATACCCC TAAAGCGCCG GAAGCAAAAC AGGTGAAATT GGGAATTGTG
CAAATTGTTG AACACCCCGC TCTTGATGCA GCCAGACAAG GATTTTTGGA TCTGTTAAAA
GAGAAGGGCT ACGACGAACA AAGATTAGTT GTGGACTACC AAAATGCCCA GGGGGATCAG
GCCAACCTGC AGACCATTGC TCGCAAATTT GTGCAGGAGA AATCGAACCT AGTTCTGGCC
ATTGCTACCC CTTCTGCCAT GGCCATGGCT AATGAAACAA CAGATATTCC TATTCTGATT
ACTGCGGTTA CTGATCCTGT TAGTGCCAAG TTGGTAAAGA GTTTGGAACA ACCGGGGACC
AATGTTACCG GGACATCAGA TTTGAACCCA GTAAAAGATC AGTTGCAACT GATTAAAGAG
CTTGTTCCAT CGGCCAAAAG AGTTGGGGTT ATTTTTAATG CCAGCGAAAT AAATTCCCAA
GTTCAGATTG ATTTAGCTGA TAAGGTTGCC CCTGAATTGG GACTGGAATT AGTAAAAGTA
ACAGTAACAG CTAGCAGTGA AGTCATGCAA GCAGCACAGT CGTTGGTAAA AAAAGTTGAT
GCAATTTACC TGCCCACCGA TAATATGGTG ATATCCTCCA TGGCAGCTGT CCTCAAAGTG
GCAGAGGAGA ATAAGCTGCC CGTTGTTGCT GGAGAAAGCA ACGCTGTGGA AAATGGTGCC
CTGGCCACCA TAGGATATGA AGAAGAAAGC TAA
 
Protein sequence
MKKILLSLMA MLLAVGIIGC GGGTDTPKAP EAKQVKLGIV QIVEHPALDA ARQGFLDLLK 
EKGYDEQRLV VDYQNAQGDQ ANLQTIARKF VQEKSNLVLA IATPSAMAMA NETTDIPILI
TAVTDPVSAK LVKSLEQPGT NVTGTSDLNP VKDQLQLIKE LVPSAKRVGV IFNASEINSQ
VQIDLADKVA PELGLELVKV TVTASSEVMQ AAQSLVKKVD AIYLPTDNMV ISSMAAVLKV
AEENKLPVVA GESNAVENGA LATIGYEEES