| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1544 |
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| Symbol | |
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| ID | 4957928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 1674975 |
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| End bp | 1676681 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640180717 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001112897 |
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| Protein GI | 134299401 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTACA GCGGGGTAAT TACTTCTGCC ATTAACAGTT TAAAAAATCT GCTACCCTGT
CAGGTCACCC TTTGGTACCA GAGGAAAATA ATCTATACAT CTTTGCCAAA CCCACTTAGC
CAGTTGAATG ACTGGCCCAT TATCGAGGAA GCTAAACGAC AAAATTCTGC CATTATGATT
AATTCCCCCA GACAGCACCA CCTCTGTGCC CAATGTCCGG TGATCGATAT GTGCTCCTTG
GCCCTTGAGT TATTTTTCCC CTTTGCGGAA AATTCATTGA CATCCGGCAG CGGTCTTTGC
TTGCAATTTC CTCTAGAATC CCTGACCTCC ATGCAGGTAA TGGGTTTAAA CCAATGGCTG
CGCCACCTGA AAAGCTATGC TCGTTATTTT GAATTTTTAA TCAAAGAAGG TGTCTATAAA
CAAAAGGAGT TGTTGCATAC TCAACAGCTC AATTATCTTT TATCCCTTGT CCCAGAGGGC
ATCGTCTTGT TGGATGAGCA AAAAAAAATC AGCACTCTCA ACGAAAGGGC CGAACAACTC
AATCTGGCCC ATCACTATCA TCACAAAAGG GATCTAAAGG ACATCCATAC CCAGGGACAT
CAATTCAATT CAGCCCTGTC CCCTATCCAG ATCAAGGTGA AAAACTTTTA TCAGGATAAA
AAATTCATTG GTGCCATCTG CCATACCCAG AACTTTGACA CGATTAGCCC TCTACCACAA
AGGACCCAAC GGTCCCCAGT GTTCCCTGGG ATTATCGGCA AAGGTCCCGC CCTGCAAAAA
ATTCTTGAGA TTATCAAACA AGTTGCTAAA TCCGAATCCA CTGTTTTGCT GCGGGGTGAA
AGCGGAACAG GCAAGGAATT ATTTGCCCAT TCCATTCATG AATTAAGTTC AAGAAATAGC
GGGCCCTTTG TAGCCATTAA CTGTGCCGCT ATTCCTGAGG CTCTTTTGGA AAGTGAATTG
TTTGGTTATG AAGAAGGGTC CTTCACCGGG GCCAGAAAAG GGGGAAAACC GGGTAAGGTG
GAGCTTGCCA ATAATGGCAC CCTTTTCCTA GATGAAATTG GCGATATGCC ATTAACACTA
CAGGCAAAAC TTTTAAGGGT GATCCAAGAA AAAAACATTG AACCCGTGGG GTGCTCCTAT
CCCCTGCCCA TTAATGTGCG TTTGATCGCT GCCACCCACC GTAATTTGGA GGAAATGATC
GGAACAGGTA CCTTCCGGGA AGACTTGTTT TTTCGTTTAA ATGTCATCCC CATTTTTATT
CCACCCTTGC GACAACGCCC GGAAGACACT GAACTACTGC TTCATTATTA TTTAAGAAAA
TACTGTATCT TGTTAAAGAA ACCCTTTAAG ATTTTGTCTT ACGCCGCCTT GCAACAGTTA
GTAAAATATC ATTGGCCGGG CAACATCCGA GAACTGGAAA ATTTGGTGGA ATATCTGGTT
AATATTCACA ACCAAGATAT TATTTCTCCG GAGGATTTGC CAATCACCAT TCAACAACCA
ATCAAAGAGG AAAATCAACC AATTGGTATC CAGCCAGTGG AGCCTCAAAC TCGAAAAAGC
AGTGGACAAC GGTCTCAAGC AGAACTTATT CAGATGCTAA ATCGTTTCGG TTGGCATACT
GATGGAAAGA AAAAGGCAGC GGCTGCTTTA GGAGTTAGTT TGGCCACCCT CTACCGTCGA
ATTAAAAAAT ATAAACTAAA GGAGTAA
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| Protein sequence | MTYSGVITSA INSLKNLLPC QVTLWYQRKI IYTSLPNPLS QLNDWPIIEE AKRQNSAIMI
NSPRQHHLCA QCPVIDMCSL ALELFFPFAE NSLTSGSGLC LQFPLESLTS MQVMGLNQWL
RHLKSYARYF EFLIKEGVYK QKELLHTQQL NYLLSLVPEG IVLLDEQKKI STLNERAEQL
NLAHHYHHKR DLKDIHTQGH QFNSALSPIQ IKVKNFYQDK KFIGAICHTQ NFDTISPLPQ
RTQRSPVFPG IIGKGPALQK ILEIIKQVAK SESTVLLRGE SGTGKELFAH SIHELSSRNS
GPFVAINCAA IPEALLESEL FGYEEGSFTG ARKGGKPGKV ELANNGTLFL DEIGDMPLTL
QAKLLRVIQE KNIEPVGCSY PLPINVRLIA ATHRNLEEMI GTGTFREDLF FRLNVIPIFI
PPLRQRPEDT ELLLHYYLRK YCILLKKPFK ILSYAALQQL VKYHWPGNIR ELENLVEYLV
NIHNQDIISP EDLPITIQQP IKEENQPIGI QPVEPQTRKS SGQRSQAELI QMLNRFGWHT
DGKKKAAAAL GVSLATLYRR IKKYKLKE
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