Gene Dred_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1543 
Symbol 
ID4957848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1673853 
End bp1674968 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content44% 
IMG OID640180716 
Producthypothetical protein 
Protein accessionYP_001112896 
Protein GI134299400 
COG category[S] Function unknown 
COG ID[COG3535] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAA TCCTCATTGT TCAAGATATT TTACCATTAT CCCTGGGCAG CATTCTGTTG 
GGTTCCGGCG GTGGTGGCAA TGCCTTTATT TTGAGTACAA CCTTGGAGAA TTACTTGGGA
AAGCACAAGT CTCAAGTTGA AGTAATCCCC TACCATCAAT TGCCGGACAA CTATACCGTT
GCTTCCATTG GTTTACTTGG TTCCCCCGAA CTAATGGAAG AAAACCTGCC GGATGGCAGC
GAAGGAGAAC GGGCCATTGA ACTTCTGGAA AAAAATATTA ACCGTAAAAT CGATGCCCTC
TTTGCTCTGG AAGGGGCTGG CATCAATATC CTCTATCCTG TACTGGTGGC CGCCAGAACC
GGTATCCCTT TGGTTGACGG TGATGGCATG GGACGGGCTT TCCCGGAATT ACAGATGACC
ACTTTCCACA TCTACGGTCA ACCCAGTACC CCTTCTGCCC TTACCAATTC GGAAGGCAAA
GAGAATTTAT TGTTTTATAA GGATCATTTT TTACATTACT ACAATATTCG AAAAACTCTG
GTGGAATATG GTGGCGTAGG ATACTTCGCC GGTCTTGCTA TGAACGGACA AGAAATGAAA
GAAGCCATCA TTCCAGGCAC CCTTTCCTTT GCCCTGGAAA TGGGCCAGGC ATTAAAAAAC
AATCATTATC AAGAGGCTTT CTGGCGCCTG CAATATATTA CCAAAAACTC CATTTATGGA
CAAGCCATTG AACTCTTCAT CGGCACCGTA GTAGAATTCG GTAACATTGC TACACTAAAG
TTAAAATCCA TTATTCTTAA GGGAATTAAC CAATATCAGG ACGATACCTT TCAAGTGCTG
GTTGAAAACG AAAATGCATT TGCCTATCAC AATGAAAAGA TGGTGGCCAT GGTGCCGGAC
ATTATTTCCT TTTTGGAATA TCCCTCGGGG CAACCCATCA ATAATAATGA GATTTACACC
GGCAGGCAAA TCGCTGTGAT CGGTATTCCC TGTCCCAACC AACTGCGTAC CAGAGAGGCC
CTGGCAGTAA TTGGTCCATC TACCTTTGGA TATAAGACCC AGTACGAGCC CTTGGAGCAA
TTGCATCCAA ATTATTATTT CAACAACGGG GTTTAA
 
Protein sequence
MAEILIVQDI LPLSLGSILL GSGGGGNAFI LSTTLENYLG KHKSQVEVIP YHQLPDNYTV 
ASIGLLGSPE LMEENLPDGS EGERAIELLE KNINRKIDAL FALEGAGINI LYPVLVAART
GIPLVDGDGM GRAFPELQMT TFHIYGQPST PSALTNSEGK ENLLFYKDHF LHYYNIRKTL
VEYGGVGYFA GLAMNGQEMK EAIIPGTLSF ALEMGQALKN NHYQEAFWRL QYITKNSIYG
QAIELFIGTV VEFGNIATLK LKSIILKGIN QYQDDTFQVL VENENAFAYH NEKMVAMVPD
IISFLEYPSG QPINNNEIYT GRQIAVIGIP CPNQLRTREA LAVIGPSTFG YKTQYEPLEQ
LHPNYYFNNG V