| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1527 |
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| Symbol | |
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| ID | 4955395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1657020 |
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| End bp | 1659371 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640180701 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001112881 |
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| Protein GI | 134299385 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00585098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAAGG GAGGTATTAC TGTGCAAAAG ACACATGCTG ATAAACAAAA AGAGCAATGT
GGCTGTGGCT GTGAAGGCAA AAGAATCAAC CCAACACGAG GTTTTTCGAT GGGGAAAATC
AACTACAAAT CTGCACTGAC GAAGGACTTT GCCTTACCTA GTTCCCCATT TATTACTGAA
GAAAAAGCAG ACCAAAAGAA AACAGAACTC CGTTTAAGCG GTCTGGATTG TGCCGATTGT
GCTGCCAAAC TGGAGAGGAA AATTCAAGCC CTGCCTGGTG TGGCGGAAGC AAAGATTAAT
TTTGGTGCAG GTAAGATCAC CGTTTGCCAT ACGACCCCGG CAGAGACCAT TTTGCAGGCA
ATTAAAACAG CTGGCTACCA AGGGCGTTTA GCTAACGAAG CAAGGAAACC ACCCAAGCAA
AGCGTCTTTG AAGATACTAA GCTGGTTCTA ACGGGTTTTT CAGGTCTTAT GGTAGCAGTG
GGTTTTTTCC TCTCGTTTTC AAATATATCG GAAACTCTAG TAAATGGAGT CTATCTTGCC
GCTATCTTAA GCGGTGGATT TTATACCGCC CGAAGTGGTC TTACTTCTCT TAAGTCTGTG
TCATTGGATA TGAATTTCCT TATGACTGTG GCGGTGGTGG GCGCTGTAGC CATTGGAGAA
TGGGCTGAAG GGGCAACGGT GGTATTCCTT TTTGCTCTGG GCAATACCCT GCAGGCCTTT
ACAATGGAAA AAACCCGTAA CTCCATTCGG GCATTGATGG ATCTCTCCCC TAAAGATGCT
CTGGTACTTC GTAACGGCCA GGAACTACGG TTGCCAGTTG AGGAGCTTAG AATTGATGAC
ATCATAATTG TAAAACCCGG CGAATGTATT CCTATGGATG GTGAAGTGGT GGCAGGGACT
ACTGATGTTA ATCAGGCGCC CATCACTGGA GAATCCATGC CAATTGAGAA AACTGTTGGA
CATGAGGTTT ACGCTGGTAC GATGAACGGA CATGGGGCCA TTGAGGTTAA AGTTACCAAG
TTGGTGGAAG ATACCACATT GGCGAAAATC ATAAACCTTG TGGAAGAGGC CCAGGCTCAA
AAAGCACCCT CCCAACAGCT TGTTGATGTA TTCGCTAAGT ACTATACCCC TGCAGTGGTC
ATAGGCGCTG TACTAATAGC TTTGGTTCCT TGGTTATTCT TCGCACAGCC CTTTCAACTC
TGGATTGAAC GGGCGCTGAT ACTGTTGGTA ATTTCTTGTC CCTGCGCCCT TGTTATATCC
ACTCCTGTAT CCATTGTGGC TGCCATCGGC AGTGCTGCCC GAAAAGGGGT ATTAATTAAA
GGGGGAGCTT ATCTGGAGGA AGCGGGGTCT TTAAAGGTAA TTGCCTTTGA TAAAACCGGC
ACCCTCACCC GGGGCAGGCC GGAAGTGGCT GCAGTAATAC CCGTGGATGG AGTAAGCTCC
CAAAGGGTGA TTGAACTTGC TGCTGCCATC GAAAAACGTT CCCAGCATCC ATTGGCCGAG
GCCATTTTGA GGTATGCTAA GGAGAAGGAG ATTAAAGTAC CCATAGGAAC AGAGTTTCAA
TCCTTTACAG GTAAAGGTGC TGCGGCAATT GTGGATGGTA TGGTCTGTTA CATTGGTAAC
AGTCGTTTGT TTGAAGAGTT AAATCTTTTC CCAGCCCCCC TGCAGGAACA GATTACTGTG
CTGCAGAATC AAGGAAAAAC AGTGATGATT TTGGGCAGTG GACATGAAGT CCTGGGGCTT
ATTGCGGTGG CTGACCAAAT TCGCGAAAGC AGCCGGGCAG CCGTGGCAGG GCTGCGTCAG
GCTGGTATTA GTCAACTGGT AATGCTAACT GGTGATAACA CCGGAACCGC CAGGATAATT
GCCCAGGAAT TAGGGATTGA TGATTACCGG GCAGAACTTT TACCTGAAAA TAAATTAAAG
GCCATTCAAC AATTACAGCA GGAGTATGGT AAGGTAGGGA TGGTGGGTGA TGGCATCAAC
GATGCACCAG CCCTGGCCAC TGCCGCTGTA GGCATTGCTA TGGGGGGAGC CGGCACCGAT
ACTGCTTTGG AAACTGCGGA CATTGCATTG ATGGCCGACG ATTTAAGTAA ACTACCCTAT
GCCATGCACC TGAGTAAACA GACCCTGCGG ATTATTAAAC AGAATATCTG GTTTTCCCTG
GCTATAAAAG CTGTGTTTAT TGCTGCTACC TTCTTGGGTT TTGCCAACCT GTGGATGGCT
GTATTTGCCG ATACCGGAGC GGCCCTTTTG GTGATTGCTA ATGGGATGAG ATTAATGAAG
GTGGAGGACC CCTATACAAG GGATAGCTTG GATTCCCGTA AATTATCATC CCAAACCTGT
ACCAGTGTGT AA
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| Protein sequence | MDKGGITVQK THADKQKEQC GCGCEGKRIN PTRGFSMGKI NYKSALTKDF ALPSSPFITE
EKADQKKTEL RLSGLDCADC AAKLERKIQA LPGVAEAKIN FGAGKITVCH TTPAETILQA
IKTAGYQGRL ANEARKPPKQ SVFEDTKLVL TGFSGLMVAV GFFLSFSNIS ETLVNGVYLA
AILSGGFYTA RSGLTSLKSV SLDMNFLMTV AVVGAVAIGE WAEGATVVFL FALGNTLQAF
TMEKTRNSIR ALMDLSPKDA LVLRNGQELR LPVEELRIDD IIIVKPGECI PMDGEVVAGT
TDVNQAPITG ESMPIEKTVG HEVYAGTMNG HGAIEVKVTK LVEDTTLAKI INLVEEAQAQ
KAPSQQLVDV FAKYYTPAVV IGAVLIALVP WLFFAQPFQL WIERALILLV ISCPCALVIS
TPVSIVAAIG SAARKGVLIK GGAYLEEAGS LKVIAFDKTG TLTRGRPEVA AVIPVDGVSS
QRVIELAAAI EKRSQHPLAE AILRYAKEKE IKVPIGTEFQ SFTGKGAAAI VDGMVCYIGN
SRLFEELNLF PAPLQEQITV LQNQGKTVMI LGSGHEVLGL IAVADQIRES SRAAVAGLRQ
AGISQLVMLT GDNTGTARII AQELGIDDYR AELLPENKLK AIQQLQQEYG KVGMVGDGIN
DAPALATAAV GIAMGGAGTD TALETADIAL MADDLSKLPY AMHLSKQTLR IIKQNIWFSL
AIKAVFIAAT FLGFANLWMA VFADTGAALL VIANGMRLMK VEDPYTRDSL DSRKLSSQTC
TSV
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