Gene Dred_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1523 
Symbol 
ID4955787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1651413 
End bp1652729 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content48% 
IMG OID640180698 
Productmajor facilitator transporter 
Protein accessionYP_001112878 
Protein GI134299382 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.295641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATATTG CACAACGATT AGATAGGCTG CCACTGGTTC CTATGCATTG GTCCATTTTA 
ATTGCGACTG GTGTTGGCTG GCTTTTTGAT TCCATGGATG TGGGGTTAAT ATCCTTTGTT
ATGCCAGCGC TACAAAGGGA CTGGGGGTTA TCACCAGCCC AACTGGGCTT GATCGGTAGT
GTAGGCATGG TGGGTATGGC CTTGGGGGCT GCCCTCAGTG GATCATTTGC AGATAGATAT
GGGCGAAAAA AAGTTATCTT ATTTACTTTA GTTCTGTTTG GGCTGGCCAC TGGTTTTGCA
GGGTTGGCCA CAGGTCTTAC CACCATGCTG TTGGCCAGAT TTTTGGTTGG GTTGGGCCTA
GGTGGTGAAC TCCCTGTGGC GTCAACGCTG GTCAGTGAAA TCTCGCCCCT TTTGGTTCGG
GGGCGCTTTG TGGTTTTATT GGAGAGTTTC TGGGCCTGGG GGTGGATAGT TGCGGCCTTA
ATAGCCTATC TGCTGATTCC AGAGTATGGT TGGCGGGTAG CTTTTTTCAT CGGTGCAGTA
CCAGCACTGG CAGCGGTCTT TTTAAGACAG GCCATTCCTG AATCACCCCG TTTTTTAATA
CAAAAGGGCC GCTACGAAGA GGCAGATGCC ATTGTATCCC TTATGGAACA ACAAGCGGGT
ATGGAGATTA GTAAGGAGAA TAAGACCAAG ACTCAAGCAA AGGAGAACGG GGGTACCTTT
AGTGACCTCT GGTCAGTTCA ACTCCGGCGT CGTACATTAA CTCTCTGGAT ATTATGGCTG
GGTATAAACT TTGGCTATTA TGGATTTGTG ATGTGGATTC CTACCTTACT GGTGGGTAAA
GGATTTATCA TTATTAAGAG TTTACAGTAT GTACTACTCA TGACTTTGGC CCAAATCCCC
GGTTACTTTA CGGCTGCTTA TCTTATTGAA GTGGTTGGGC GCAAGGTCGT TCTTACTATT
TTTCTAGCAG GCACCGCTAT CTCTGCTTAC TTTTTTGGTC AAAGTGATAC GGTAAGAGAG
ATTATGGTTG CGGGAAGTTT CTTGTACTTT TTCAGTCTTG GGGCTTGGGG GGCGGTCTAC
GCTTATACAC CAGAGAATTA TCCAACCATA TCCAGGGGAA CTGGTGTGGG CTGGGCAGCT
GCTGTTGGTA GGTTAGGCGC CATAGCAGCA CCATATTTGG TAGGGGTTGT TTATCAGGCC
CAGGGAAAGG AAAGCGGTTA CACCACTGTA TTTCTGATGC TGACGGTAGT TTTTGCCGTA
ACGGCACTGG CAGTCTTGTT TCTAGGTCAA GAAACAAGGG GACGGTCGTT AGCCTGA
 
Protein sequence
MNIAQRLDRL PLVPMHWSIL IATGVGWLFD SMDVGLISFV MPALQRDWGL SPAQLGLIGS 
VGMVGMALGA ALSGSFADRY GRKKVILFTL VLFGLATGFA GLATGLTTML LARFLVGLGL
GGELPVASTL VSEISPLLVR GRFVVLLESF WAWGWIVAAL IAYLLIPEYG WRVAFFIGAV
PALAAVFLRQ AIPESPRFLI QKGRYEEADA IVSLMEQQAG MEISKENKTK TQAKENGGTF
SDLWSVQLRR RTLTLWILWL GINFGYYGFV MWIPTLLVGK GFIIIKSLQY VLLMTLAQIP
GYFTAAYLIE VVGRKVVLTI FLAGTAISAY FFGQSDTVRE IMVAGSFLYF FSLGAWGAVY
AYTPENYPTI SRGTGVGWAA AVGRLGAIAA PYLVGVVYQA QGKESGYTTV FLMLTVVFAV
TALAVLFLGQ ETRGRSLA