| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1498 |
|---|
| Symbol | |
|---|
| ID | 4957679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1624593 |
|---|
| End bp | 1625687 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640180673 |
|---|
| Product | spore coat protein (inner) |
|---|
| Protein accession | YP_001112853 |
|---|
| Protein GI | 134299357 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5337] Spore coat assembly protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA ACGGGCGAAA TATACCGTCC TATTCTTTGT TTATTAACCC CAGGGATCTT
CGGGAGCTTC GCAGTGATAT ATGGAACAAT GAGCATGTTC CGGCTCAACT TAAAATAAGT
AACACATCCT ATCAAGTTGA GATAGCCTAT CGAGGGGCCC TTACCCGTGA ATTACCGAAG
AAATCATACC ACCTCAAGTT TATAAAACCC GAGACCTTTG CTGGTGGGCG GGAAATTCAT
TTAAATGCTG AGTATCTTGA TCCATCGCTA ATGCGCAATA AACTTTCATT CGATTTCTTT
AAAAGTTTAG GTACACTGAG CCCAGAGGCC AAATATGTTT TACTTTTGTT AAATGGTACG
TTTATGGGTG TATTCCTTCA ACTGGAATCT GTGGATGATT TGCTTATAAA AAAGAGGGGT
CTGCCAGCTG GGGCTATTTT TTATGCTCAC AATCATGATG CGAACTTTTC CTTGCTAGCC
CCTGATACCG ATGATGTTAA GGATTCCCTT ATGGATGGTT ATAAACGAAA GGTTGGTACT
AAGTCAGATG ATGGATATCT TTGTGAACTC ATTTATAAAA TCAACACGGT TTCCCGTGAA
GATTTTGGCA AAGAGATTGT GAAGTATGTT GATATTGGGA AATATCTGCG ATGGTTAATA
GGGGTGGTAT GTACACAAAA CTATGATGGC TTTATTCAAA ACTATGCCCT GTATCGTAAC
TCTGATAACG GCTTGTTTGA AATGATCCCC TGGGATTATG ATGGAACTTG GGGACGTGAT
TGTTATGGAA AGATTATGGA ATACAACTAT ATCCCTATTC GGGGTGCCAA TACTCTAACC
GCTCGAATAA TGGATGTTCC TTATTTTCGG CATCAGTACC GGCTAATGTT TGAGGAAACC
ATAGAGACAC TCTTCATCCC CGAGGTTCTT GAACCCCAGG TTACCGCCCT TTATAATGTG
CTTCGTCCCC ATATTAACCT TGATCCTTAT AAACAAAAAT CTCTTAGAAA GTTTGATGCA
GAACCTGAGT ATATTCTCCA ATTTATTAAG AAACGGAACA AATTTTTAAA GGATCAATTA
TTGGAATTGG TATGA
|
|---|
| Protein sequence | MENNGRNIPS YSLFINPRDL RELRSDIWNN EHVPAQLKIS NTSYQVEIAY RGALTRELPK
KSYHLKFIKP ETFAGGREIH LNAEYLDPSL MRNKLSFDFF KSLGTLSPEA KYVLLLLNGT
FMGVFLQLES VDDLLIKKRG LPAGAIFYAH NHDANFSLLA PDTDDVKDSL MDGYKRKVGT
KSDDGYLCEL IYKINTVSRE DFGKEIVKYV DIGKYLRWLI GVVCTQNYDG FIQNYALYRN
SDNGLFEMIP WDYDGTWGRD CYGKIMEYNY IPIRGANTLT ARIMDVPYFR HQYRLMFEET
IETLFIPEVL EPQVTALYNV LRPHINLDPY KQKSLRKFDA EPEYILQFIK KRNKFLKDQL
LELV
|
|---|
| |