| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1473 |
|---|
| Symbol | |
|---|
| ID | 4957325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 1600199 |
|---|
| End bp | 1601602 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640180648 |
|---|
| Product | ABC-type sugar transport system periplasmic component-like protein |
|---|
| Protein accession | YP_001112828 |
|---|
| Protein GI | 134299332 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATC CTACGTATAA ACGAATCCTT TCGATGTTAT TAATATGCTC TCTGGTTTTT
GTTGCTGGTT GTCCCGGCAA AGAAGCACAG CCAAAACCAG AGACCCAGAA GAAAATTAAG
ATCGGCGTAA GTCTTGCAGC AATGGAGTTT GACGGGAACA AGATCATTAA AAAATTCATG
CAGGAACGAA GTAAAAAAGA AAAGGTTCAA TTAATCTGGC TGGATGCTAA GATGGACCCC
TCTCAGCAGG AAAAAGATGT TGACAAGTTA ATTCAACAAA AGGTTAAAGC CATTATCTTG
CAAACTGTTG ATCCCAAAGA AGGTGCAAAA CTGGTCGATA AGATTGTTCA GGCTAAAATC
AAAGTTATTG GTTTGGAAAC CCTGCCCTAT AATGCACCAT TGGATGGCTA CGTAGCCTCT
GATCATACTA GGGCTGGTGA ATTACAGGGT AAATTTATTC TAAACCAGGT TAGCAATCAG
AACTCGGGGG GGCAAAAGCA GGGCCAGAGT CAACAGGGAA ATCAAAGCTC TGGGGAACAA
AGTAGTCAAA GTTCTGAACA AACAAACCAG CAACAGGGTG CAAAAAGCAA CATTAAGATT
CTATTCCTGA AGGGTGATCC AATGGATCCA GTTGCTCAAA TGATTGTGGA TGGTGCCCGC
AGTGTGCTGG GACAAAGCAA AAATGTGGAA AAAATGATTG TCGAGGAACA TCCGGAGGGT
GACCCTCAAA TGGCTCAAAT GACGGTCATG AATACCCTGC AGGAAGGTTC CGTTGACGCT
ATTTTGGCCA CCGATGATCG TTTAGCAGAG GCCGCTATGA AAGCTCTGAA AGCAGAAAAC
ATGACTCAAA AGATCCTCAC TGTCGGTGTG GGTGCAGACC AAAAAACTTC CCAGGCCCTG
GCCAATGGCG ATCACGATGC CGAAATTGAT ATAATGCCGG AACATCTGGC TAATTCTGCT
TTGGATGCTG CCTTGGACAT CGCTGAAAAG GGAAACTGGA ATAATGACAC GGTCATTCAA
AACGGCAATT TTGATATACC TGCTAAAATT ATTCCTGTGC GTCTCATCGA TCAAGAACAG
GTACAGCTAC TGACAGCCCG CTGGGGTGAC CTTAAAAAGG AAGAAAAAAA GTCCCAGGAA
CAACAAGGAC AGGGACAGCA ACAGGGGTCC TCTGAGGGGA ATTCTTCTCA AGGTGGGTCA
GAAGGAGAAT CCGGCCAAGG CGGCGGGGGG CAAGGTAACC AAGGTAAAAA AACTAAGGTA
AAGATTGTTA CACAGGACGG CAAAGTAATG GAAGTAGAAG TGGATGGAGA AATCAAAAAA
ATCGAACAGG GTGCTGGGGG CGAAAAGGGA CAGGAAGGAC AGCAACAGGG CTCTCAAGGT
GGCGGCGGTC AGGGAGGTCA GTAA
|
|---|
| Protein sequence | MNNPTYKRIL SMLLICSLVF VAGCPGKEAQ PKPETQKKIK IGVSLAAMEF DGNKIIKKFM
QERSKKEKVQ LIWLDAKMDP SQQEKDVDKL IQQKVKAIIL QTVDPKEGAK LVDKIVQAKI
KVIGLETLPY NAPLDGYVAS DHTRAGELQG KFILNQVSNQ NSGGQKQGQS QQGNQSSGEQ
SSQSSEQTNQ QQGAKSNIKI LFLKGDPMDP VAQMIVDGAR SVLGQSKNVE KMIVEEHPEG
DPQMAQMTVM NTLQEGSVDA ILATDDRLAE AAMKALKAEN MTQKILTVGV GADQKTSQAL
ANGDHDAEID IMPEHLANSA LDAALDIAEK GNWNNDTVIQ NGNFDIPAKI IPVRLIDQEQ
VQLLTARWGD LKKEEKKSQE QQGQGQQQGS SEGNSSQGGS EGESGQGGGG QGNQGKKTKV
KIVTQDGKVM EVEVDGEIKK IEQGAGGEKG QEGQQQGSQG GGGQGGQ
|
|---|
| |