Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1425 |
Symbol | |
ID | 4956547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1544973 |
End bp | 1546253 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640180600 |
Product | hypothetical protein |
Protein accession | YP_001112780 |
Protein GI | 134299284 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0163769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGGGTT TGTACGAAGC GTTAATGTCC GCATCCAGGG CCCATGCTAA ATGGGAATTG GAAATGTCCA ATAATATTAT ACGAAACCGA AAACATCTGC TGGTTTTAGC TCTTATGATG CTTCCATTAG TTATTCCTGC CATTGGTCAT GCTGCGGATT TACCGGGATT TATCGGTGGT AAAAGTGCCT ATGGACCATC CCACTATAAT CCGATGATGT TCTACGGTTC CATGGCAGTT GGTATTTGTG CGGGGTTAAT TACTGGCTGC ATTGGTGCTG GCGGTGGTTT TGTTATTACG CCAGCCCTAA TGAGTCTAGG AGTAAAAGGT ATTTTAGCAG TTGGAACAGA CCAATTTCAT ATTTTTGCAA AGGCCATCAT GGGTACCGTA ATTCATAAAA AATTGGGTAA CGTAAATGTG GCTCTTGCTA TAGCTTTCTT AGTTGGTTCC GGTATCGGTG TTACCGCGGG TGGTACATTA AACCGCGCAC TGTTTAATAT GAACCCAGTG TTGAGTGATT TTATTATTAG CTTAGTTTAT GTTGTTATGC TAGGATTCTT AGGGTTCTAT TCCATGTACG ACTTTATTAA AAACAAAAAC ACCAGTGGAG ATGCCCATGG TGGGCCAGAA GGTATGACAA AATTAGCACA GAAACTACAA GGGGTTAATA TCGCCCCTAT GGTTAAGTTT GATGAAGATA TTGTTCCTGG TGGTCGTAAA ATTTCCGGTT GGTTTGTGGC CTTCTGTGGT GCAGTGGTTG GTTTTGCAGC AGCTATTATG GGTGTAGGCG GTGGCTTCCT GACCTTTCCA ATGTTTGTTT ACGGTCTAGG CGTATCCTCC TTTACCACAG TGGGTACAGA CATTCTGCAA ATTATCTTTA CTGCGGGCTA CAGTTCCATA GCTCAGTACG CTGTTTACGG TTATATATTT TATACATTGG CTATGGGTAT GTTGGTTGGT TCCCTACTGG GCATTCAGAT TGGTGCAGCT ACCACAAAGG TGGTTTCTGG TATCTATATC CGCGCTTTCT ATGCCATTGC CATAATGGCC GGTTTTGTAA ACAGAGCATT TGCGCTGCCT GAAAAAATGG CTCAGATGGG GTACATCTCT ATAGCGAAGG AAAATGGCGT ATTATTTTCC AATATCGGTG CCTGGGTATT CTTTGGGTTA ATTCTAATCT TTGCAGTATG GATTATCCTA AGCTTTATCC GAGGTCTTCC TATCCTGCGA GCTGAAACTG CCGAAGCGTC TATGGCTAGT GGTAAAGGAG TGAGTCATTA A
|
Protein sequence | MRGLYEALMS ASRAHAKWEL EMSNNIIRNR KHLLVLALMM LPLVIPAIGH AADLPGFIGG KSAYGPSHYN PMMFYGSMAV GICAGLITGC IGAGGGFVIT PALMSLGVKG ILAVGTDQFH IFAKAIMGTV IHKKLGNVNV ALAIAFLVGS GIGVTAGGTL NRALFNMNPV LSDFIISLVY VVMLGFLGFY SMYDFIKNKN TSGDAHGGPE GMTKLAQKLQ GVNIAPMVKF DEDIVPGGRK ISGWFVAFCG AVVGFAAAIM GVGGGFLTFP MFVYGLGVSS FTTVGTDILQ IIFTAGYSSI AQYAVYGYIF YTLAMGMLVG SLLGIQIGAA TTKVVSGIYI RAFYAIAIMA GFVNRAFALP EKMAQMGYIS IAKENGVLFS NIGAWVFFGL ILIFAVWIIL SFIRGLPILR AETAEASMAS GKGVSH
|
| |