Gene Dred_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1425 
Symbol 
ID4956547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1544973 
End bp1546253 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content43% 
IMG OID640180600 
Producthypothetical protein 
Protein accessionYP_001112780 
Protein GI134299284 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0163769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGGTT TGTACGAAGC GTTAATGTCC GCATCCAGGG CCCATGCTAA ATGGGAATTG 
GAAATGTCCA ATAATATTAT ACGAAACCGA AAACATCTGC TGGTTTTAGC TCTTATGATG
CTTCCATTAG TTATTCCTGC CATTGGTCAT GCTGCGGATT TACCGGGATT TATCGGTGGT
AAAAGTGCCT ATGGACCATC CCACTATAAT CCGATGATGT TCTACGGTTC CATGGCAGTT
GGTATTTGTG CGGGGTTAAT TACTGGCTGC ATTGGTGCTG GCGGTGGTTT TGTTATTACG
CCAGCCCTAA TGAGTCTAGG AGTAAAAGGT ATTTTAGCAG TTGGAACAGA CCAATTTCAT
ATTTTTGCAA AGGCCATCAT GGGTACCGTA ATTCATAAAA AATTGGGTAA CGTAAATGTG
GCTCTTGCTA TAGCTTTCTT AGTTGGTTCC GGTATCGGTG TTACCGCGGG TGGTACATTA
AACCGCGCAC TGTTTAATAT GAACCCAGTG TTGAGTGATT TTATTATTAG CTTAGTTTAT
GTTGTTATGC TAGGATTCTT AGGGTTCTAT TCCATGTACG ACTTTATTAA AAACAAAAAC
ACCAGTGGAG ATGCCCATGG TGGGCCAGAA GGTATGACAA AATTAGCACA GAAACTACAA
GGGGTTAATA TCGCCCCTAT GGTTAAGTTT GATGAAGATA TTGTTCCTGG TGGTCGTAAA
ATTTCCGGTT GGTTTGTGGC CTTCTGTGGT GCAGTGGTTG GTTTTGCAGC AGCTATTATG
GGTGTAGGCG GTGGCTTCCT GACCTTTCCA ATGTTTGTTT ACGGTCTAGG CGTATCCTCC
TTTACCACAG TGGGTACAGA CATTCTGCAA ATTATCTTTA CTGCGGGCTA CAGTTCCATA
GCTCAGTACG CTGTTTACGG TTATATATTT TATACATTGG CTATGGGTAT GTTGGTTGGT
TCCCTACTGG GCATTCAGAT TGGTGCAGCT ACCACAAAGG TGGTTTCTGG TATCTATATC
CGCGCTTTCT ATGCCATTGC CATAATGGCC GGTTTTGTAA ACAGAGCATT TGCGCTGCCT
GAAAAAATGG CTCAGATGGG GTACATCTCT ATAGCGAAGG AAAATGGCGT ATTATTTTCC
AATATCGGTG CCTGGGTATT CTTTGGGTTA ATTCTAATCT TTGCAGTATG GATTATCCTA
AGCTTTATCC GAGGTCTTCC TATCCTGCGA GCTGAAACTG CCGAAGCGTC TATGGCTAGT
GGTAAAGGAG TGAGTCATTA A
 
Protein sequence
MRGLYEALMS ASRAHAKWEL EMSNNIIRNR KHLLVLALMM LPLVIPAIGH AADLPGFIGG 
KSAYGPSHYN PMMFYGSMAV GICAGLITGC IGAGGGFVIT PALMSLGVKG ILAVGTDQFH
IFAKAIMGTV IHKKLGNVNV ALAIAFLVGS GIGVTAGGTL NRALFNMNPV LSDFIISLVY
VVMLGFLGFY SMYDFIKNKN TSGDAHGGPE GMTKLAQKLQ GVNIAPMVKF DEDIVPGGRK
ISGWFVAFCG AVVGFAAAIM GVGGGFLTFP MFVYGLGVSS FTTVGTDILQ IIFTAGYSSI
AQYAVYGYIF YTLAMGMLVG SLLGIQIGAA TTKVVSGIYI RAFYAIAIMA GFVNRAFALP
EKMAQMGYIS IAKENGVLFS NIGAWVFFGL ILIFAVWIIL SFIRGLPILR AETAEASMAS
GKGVSH