Gene Dred_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1402 
Symbol 
ID4955988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1513784 
End bp1515724 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content39% 
IMG OID640180577 
Productglycosyl transferase family protein 
Protein accessionYP_001112757 
Protein GI134299261 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGCCATA ACCAGTGCCT AATTAGCCTA TGTATGATTG TAAAAAATGA AGAGTCCAAT 
ATCGAACGCT GTTTATCAAG TGTTCGGGAT TACGTAGATG AAATGCTTGT GTTGGATACA
GGCTCCAGTG ACCTGACACC TTTGTTAGCC AGAGAACAGG GGGCTATTGT TCGGTTTGGC
CAGTGGGAAA ATGATTTTAG CAAGGCCAGA AATCAAAGCT TACAACAGGC TCGAGGGGAA
TGGATCTTAT ATCTAGATGC AGACGAAGAA CTACCGCCGG AAACCGGCCG GGAACTGCGC
CGGTTAGCAA ATAAAAGTGA AGCCGAAGCC TTTTCCTTCA AAATAATTAA TTTTACATCC
TCTTCTGACG GTGCCCAAAA ATCACAAGGC ATAAATATCA GGATGTTTAA AAACAACCCT
AACTATGTTT TTGAAGGTGC CCTCCACGAG CAGATTCAAC CTAGTATTCT TCGCCATAAC
CCTGAAGCAA AAATTTTGTA TACCGATTTA GAAATATTAC ACTACGGGTA TTGCCTGAAT
AATCCTGAGC GTACCAAAAA AACACAACGT AACATTGCCA TATTGCTACA AATGCTGGCT
GAAAAACCCG CAGATGATTT CAGCCACTAT AATTTAGGGG TTAGTTATTA TGTCAACGGT
CAATGGGAAA AGGCCAGGGA ACATTATCAC CTGGCTAAAA AATATGCTTC TAAAACAGCC
AGCTACCTAC CGGGCCTCTT TAGAAATTAT GCGGTATGTC TATGCAGCCT TGGGGAATAC
GAGACATTCC TAAACCTTCT TCAGGAGGGA TTATCTCTTT TTCCAGACTA CCCCGACCTT
TACTTCCTGC AGGGTCAAGT CTACACTGAT TTAAAACTGT ACGTTGCTGC TGAAGACAGT
TTTCTTCAAT GTCTCCGGTT TACCAAGGTT AACCCAAACT ATATCTCCAC CACAGGGGTA
ACAAATTACT TAGCCTGCGA ACAACTGGCA GATATTTATT GTTACCTGCA GCAGTGGAAT
AAAGCACTGG ATTACCAGTT AAGGGCAGTT AACTCCGGGG CAAAAACCTA TGCTGCCGCC
CAGAGACTGG CCCAAATAGC TTCTCAACAT TTTCTAAGCC CTGAGGAAAC ATTTAGCTTT
CTACAAAATA ATCTTACTCA TTTAAAACAT CTGGATTTAA TTAAGTTATT ATTCAAAATT
AATGAGCACC GGCTTTTCTT ACAAAAACTA GAATCAATAC CACAACCTAC ACCTGGCATA
TTGTTACTGG GTATTAAATC CTGTCTTTAT CTAAGGGATT GGTCAAAAAT TAAAAGGCTA
ATATCCCAAA TCCCCCCTGG AAGTAAGGAA TTGGAGGAGG CTCGGTTATT AGTATGTATT
GGCAATATTA TAAGCTCTGA TGCAGAAACT CCGGTTATTG ATAATTTAGA GGTTACTGTC
AATGAGTTTG CCAATATTAA TAACCCATGT TCCTCTTCTT TTCTTAATTT TGCTTATCAG
TTAATTATCT ATGATCAAAA ACAAGCTCTT AAATTCTTTG CCCAAGTATT GAACAGTAAT
GATCTACCCG TTTTTTACCA CCAACTTAGC CAGTATGCCT TTTCTCATAA TAATTACCCG
TTAACACAGA AACTACAGGT TATGGCCATC TCCCATGGTT ACAGGGATTC CGATATTCTT
AACCTACTGG GGCAGACTTT TACCAAGTTG GGTCATGATA TCGAAGGAGT GTATTTGGGT
ATACTTGCCT GCCGGGAACA ACAAGACAGT AAAAATTATA TCCTTTTATT AAATAACCTA
TCTCAATATT TCATCAATTC TTTGCAAAAT ATCACCGCAT CATTACCCCA CTTTCCCTTA
ATAAATAAGC ATTTCTTATC TTTATCAACC TTTAAAGCTA AACTTGCAAG AAAGGAAGAG
TCATTTTGCC AGCTACCATA A
 
Protein sequence
MCHNQCLISL CMIVKNEESN IERCLSSVRD YVDEMLVLDT GSSDLTPLLA REQGAIVRFG 
QWENDFSKAR NQSLQQARGE WILYLDADEE LPPETGRELR RLANKSEAEA FSFKIINFTS
SSDGAQKSQG INIRMFKNNP NYVFEGALHE QIQPSILRHN PEAKILYTDL EILHYGYCLN
NPERTKKTQR NIAILLQMLA EKPADDFSHY NLGVSYYVNG QWEKAREHYH LAKKYASKTA
SYLPGLFRNY AVCLCSLGEY ETFLNLLQEG LSLFPDYPDL YFLQGQVYTD LKLYVAAEDS
FLQCLRFTKV NPNYISTTGV TNYLACEQLA DIYCYLQQWN KALDYQLRAV NSGAKTYAAA
QRLAQIASQH FLSPEETFSF LQNNLTHLKH LDLIKLLFKI NEHRLFLQKL ESIPQPTPGI
LLLGIKSCLY LRDWSKIKRL ISQIPPGSKE LEEARLLVCI GNIISSDAET PVIDNLEVTV
NEFANINNPC SSSFLNFAYQ LIIYDQKQAL KFFAQVLNSN DLPVFYHQLS QYAFSHNNYP
LTQKLQVMAI SHGYRDSDIL NLLGQTFTKL GHDIEGVYLG ILACREQQDS KNYILLLNNL
SQYFINSLQN ITASLPHFPL INKHFLSLST FKAKLARKEE SFCQLP