Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1402 |
Symbol | |
ID | 4955988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 1513784 |
End bp | 1515724 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640180577 |
Product | glycosyl transferase family protein |
Protein accession | YP_001112757 |
Protein GI | 134299261 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGCCATA ACCAGTGCCT AATTAGCCTA TGTATGATTG TAAAAAATGA AGAGTCCAAT ATCGAACGCT GTTTATCAAG TGTTCGGGAT TACGTAGATG AAATGCTTGT GTTGGATACA GGCTCCAGTG ACCTGACACC TTTGTTAGCC AGAGAACAGG GGGCTATTGT TCGGTTTGGC CAGTGGGAAA ATGATTTTAG CAAGGCCAGA AATCAAAGCT TACAACAGGC TCGAGGGGAA TGGATCTTAT ATCTAGATGC AGACGAAGAA CTACCGCCGG AAACCGGCCG GGAACTGCGC CGGTTAGCAA ATAAAAGTGA AGCCGAAGCC TTTTCCTTCA AAATAATTAA TTTTACATCC TCTTCTGACG GTGCCCAAAA ATCACAAGGC ATAAATATCA GGATGTTTAA AAACAACCCT AACTATGTTT TTGAAGGTGC CCTCCACGAG CAGATTCAAC CTAGTATTCT TCGCCATAAC CCTGAAGCAA AAATTTTGTA TACCGATTTA GAAATATTAC ACTACGGGTA TTGCCTGAAT AATCCTGAGC GTACCAAAAA AACACAACGT AACATTGCCA TATTGCTACA AATGCTGGCT GAAAAACCCG CAGATGATTT CAGCCACTAT AATTTAGGGG TTAGTTATTA TGTCAACGGT CAATGGGAAA AGGCCAGGGA ACATTATCAC CTGGCTAAAA AATATGCTTC TAAAACAGCC AGCTACCTAC CGGGCCTCTT TAGAAATTAT GCGGTATGTC TATGCAGCCT TGGGGAATAC GAGACATTCC TAAACCTTCT TCAGGAGGGA TTATCTCTTT TTCCAGACTA CCCCGACCTT TACTTCCTGC AGGGTCAAGT CTACACTGAT TTAAAACTGT ACGTTGCTGC TGAAGACAGT TTTCTTCAAT GTCTCCGGTT TACCAAGGTT AACCCAAACT ATATCTCCAC CACAGGGGTA ACAAATTACT TAGCCTGCGA ACAACTGGCA GATATTTATT GTTACCTGCA GCAGTGGAAT AAAGCACTGG ATTACCAGTT AAGGGCAGTT AACTCCGGGG CAAAAACCTA TGCTGCCGCC CAGAGACTGG CCCAAATAGC TTCTCAACAT TTTCTAAGCC CTGAGGAAAC ATTTAGCTTT CTACAAAATA ATCTTACTCA TTTAAAACAT CTGGATTTAA TTAAGTTATT ATTCAAAATT AATGAGCACC GGCTTTTCTT ACAAAAACTA GAATCAATAC CACAACCTAC ACCTGGCATA TTGTTACTGG GTATTAAATC CTGTCTTTAT CTAAGGGATT GGTCAAAAAT TAAAAGGCTA ATATCCCAAA TCCCCCCTGG AAGTAAGGAA TTGGAGGAGG CTCGGTTATT AGTATGTATT GGCAATATTA TAAGCTCTGA TGCAGAAACT CCGGTTATTG ATAATTTAGA GGTTACTGTC AATGAGTTTG CCAATATTAA TAACCCATGT TCCTCTTCTT TTCTTAATTT TGCTTATCAG TTAATTATCT ATGATCAAAA ACAAGCTCTT AAATTCTTTG CCCAAGTATT GAACAGTAAT GATCTACCCG TTTTTTACCA CCAACTTAGC CAGTATGCCT TTTCTCATAA TAATTACCCG TTAACACAGA AACTACAGGT TATGGCCATC TCCCATGGTT ACAGGGATTC CGATATTCTT AACCTACTGG GGCAGACTTT TACCAAGTTG GGTCATGATA TCGAAGGAGT GTATTTGGGT ATACTTGCCT GCCGGGAACA ACAAGACAGT AAAAATTATA TCCTTTTATT AAATAACCTA TCTCAATATT TCATCAATTC TTTGCAAAAT ATCACCGCAT CATTACCCCA CTTTCCCTTA ATAAATAAGC ATTTCTTATC TTTATCAACC TTTAAAGCTA AACTTGCAAG AAAGGAAGAG TCATTTTGCC AGCTACCATA A
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Protein sequence | MCHNQCLISL CMIVKNEESN IERCLSSVRD YVDEMLVLDT GSSDLTPLLA REQGAIVRFG QWENDFSKAR NQSLQQARGE WILYLDADEE LPPETGRELR RLANKSEAEA FSFKIINFTS SSDGAQKSQG INIRMFKNNP NYVFEGALHE QIQPSILRHN PEAKILYTDL EILHYGYCLN NPERTKKTQR NIAILLQMLA EKPADDFSHY NLGVSYYVNG QWEKAREHYH LAKKYASKTA SYLPGLFRNY AVCLCSLGEY ETFLNLLQEG LSLFPDYPDL YFLQGQVYTD LKLYVAAEDS FLQCLRFTKV NPNYISTTGV TNYLACEQLA DIYCYLQQWN KALDYQLRAV NSGAKTYAAA QRLAQIASQH FLSPEETFSF LQNNLTHLKH LDLIKLLFKI NEHRLFLQKL ESIPQPTPGI LLLGIKSCLY LRDWSKIKRL ISQIPPGSKE LEEARLLVCI GNIISSDAET PVIDNLEVTV NEFANINNPC SSSFLNFAYQ LIIYDQKQAL KFFAQVLNSN DLPVFYHQLS QYAFSHNNYP LTQKLQVMAI SHGYRDSDIL NLLGQTFTKL GHDIEGVYLG ILACREQQDS KNYILLLNNL SQYFINSLQN ITASLPHFPL INKHFLSLST FKAKLARKEE SFCQLP
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