Gene Dred_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1397 
Symbol 
ID4955978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1505847 
End bp1507232 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content39% 
IMG OID640180572 
Productmannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 
Protein accessionYP_001112752 
Protein GI134299256 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA TCATTCTGGC TGGCGGGATC GGAACAAGGT TGTGGCCTCT AAGCCGAACT 
AACTACCCCA AGCAGTTCTT AAAGATTAAA AAGATGGCAA GATCCATATT TCAAATGACC
TATGAAAGGT GTCTCAAACT TACAGATCAT CAGCAAATCT ATATTGTTAC CAATATTAAC
TACAAATTTC TGGTTGTGGG GCAAATTGAA GAACTGGGCC ATCAAATAGA TGACCGACAG
ATTTTAATTG AACCTGTGGG TAAAAATACA TTACCCGCTA TTTATTACGG AGTGAAAGAG
ATTCAAAAGC AGGGAGATGA TATTACTGTC GTTTTCCCTT CTGACCATTT GATTAAGGAT
GAAGAGCGGT TTATAAATAC CATCAAACAA GGTGAAAATC TAGCGGATCA ATACATTATT
ACCTTTGGCA TTTGTCCTAC TAAACCTCAC ACCGGTTACG GCTACATTAA ACCCAAAGAG
CCCCTGCAGG TTGGTAACCG TGTGGATCAG TTTAAAGAAA AACCGGATAA AGAAACGGCT
GTAAACTATT TAGCAATGGG TTACCTCTGG AATAGTGGCA TGTTTATGTT TAGAACAGAT
ATTTTTTGCC AGGAAGTAAA AGAGTACTTA CCGGATGTAT GCGATGCTTT TAAGTCCCCA
AATATTCTTG ATATTTATGA CCAAACACCA AGTGTATCAA TTGATTATGG TTTAATGGAA
AAATCTAAAA ATGTAGCTGT TATTCCCCTG GATGTACACT GGAGCGATTT AGGAAGTTTT
GATGCCTTTT ACGATGAATT TGATGTGGAT GAACAGGGAA ATCTCAACTT TGATAAGGAC
ATTTTAATTG ACTCATCTAA CAACATGCTT TACTCAAACA AAGAGAAAGC AGTGGCTTTG
ATAGGAGTAC ATGATCTTAT TTTGGTGGAT CAGAAGGATG CCTTGCTTGT TTGTCGGAGA
GACCATTCCC AACGGGTTAA AGAAGTTGTC GATCGTTTAA AAGAACTGAA TGATCCCAGA
GCGGATTATC ATTTAACCGC CTACCGCCCC TGGGGGTCCT ACACTATTTT AGAAGAGGGT
TTTTTCTATA AAATTAAACG TATAACAGTA CTGCCGGGAA AGAAATTAAG CTACCAACTG
CACCACCATC GTAGTGAACA CTGGGTTGTG GTTAAGGGGA CAGCGAAGGT TACTATAGAA
GGTAAAGAAA CCTTTGTCAG AAGCGGTGAA AGTACCTTTG TACAGACCGG CTTTAAGCAC
AGGTTGGAAA ATCCAGGTAA AGTTTTACTG GAAGTCATAG AAGTACAGCT TGGTGAGTAT
TTAAATGAAG ACGATATCGT AAGATTAGAT GATGATTTTG GTAGGTCTAG TGGAACTTTG
GAGTAG
 
Protein sequence
MKVIILAGGI GTRLWPLSRT NYPKQFLKIK KMARSIFQMT YERCLKLTDH QQIYIVTNIN 
YKFLVVGQIE ELGHQIDDRQ ILIEPVGKNT LPAIYYGVKE IQKQGDDITV VFPSDHLIKD
EERFINTIKQ GENLADQYII TFGICPTKPH TGYGYIKPKE PLQVGNRVDQ FKEKPDKETA
VNYLAMGYLW NSGMFMFRTD IFCQEVKEYL PDVCDAFKSP NILDIYDQTP SVSIDYGLME
KSKNVAVIPL DVHWSDLGSF DAFYDEFDVD EQGNLNFDKD ILIDSSNNML YSNKEKAVAL
IGVHDLILVD QKDALLVCRR DHSQRVKEVV DRLKELNDPR ADYHLTAYRP WGSYTILEEG
FFYKIKRITV LPGKKLSYQL HHHRSEHWVV VKGTAKVTIE GKETFVRSGE STFVQTGFKH
RLENPGKVLL EVIEVQLGEY LNEDDIVRLD DDFGRSSGTL E