Gene Dred_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1376 
Symbol 
ID4955822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1479341 
End bp1480012 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content41% 
IMG OID640180551 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001112731 
Protein GI134299235 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000031441 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTAG GCCCATTGGA CATAAATTTT ATCATAAAAA TTCTACCCAA TTTATTATTG 
GGAGCTGTCA TGACAATTAA GTTAACTTTT TTTGCCATTA CCTTTGGGAC CTTAATTGGT
TTGCTTGTCG CCCTAGCTAA AATTTCCAGC TTTAAAATAT TACGTTGGTT TGGGGGACTC
TACACCTGGG TTATCCGTGG TGTCCCCCTT CTTCTTCAAC TAATGTTTTT ATATTATGGC
CTACCCTTTA TGGGACTTAC TCTGAATGAA TTTACCGTGG CTGTCATTGG TATGTCTGTG
TGCGGCGGTG CCTATATTGC AGAAATTATG CGGGCCGGTA TTCAGTCCAT TGATAAAGGT
CAGATGGAAG CAGCACTTTC CATGGGTATG ACTTACCCCC AGGCCATGCG CCGGGTTATT
CTTCCCCAAG CATATAAACG CCTGCTTCCT CCAATGGGTA ACGAATTTAT TACATTAATG
AAAGACAGTG CACTGGTCTC TGTTATTTGT ATGACTGAAC TATTAAGGGC AGCTAACCTG
TTGCAAAACG CTACTTTTCG TCCCATTGAG ATTTATGTTG TTGCAGGACT CCTTTATCTG
ATAATGACAA CTTTCTTTAC AATGGTGGTA AACCGCTTGG AAAAAAAATT AGCGGTCTCC
GAAGGTGATT AG
 
Protein sequence
MHVGPLDINF IIKILPNLLL GAVMTIKLTF FAITFGTLIG LLVALAKISS FKILRWFGGL 
YTWVIRGVPL LLQLMFLYYG LPFMGLTLNE FTVAVIGMSV CGGAYIAEIM RAGIQSIDKG
QMEAALSMGM TYPQAMRRVI LPQAYKRLLP PMGNEFITLM KDSALVSVIC MTELLRAANL
LQNATFRPIE IYVVAGLLYL IMTTFFTMVV NRLEKKLAVS EGD