Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1376 |
Symbol | |
ID | 4955822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 1479341 |
End bp | 1480012 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640180551 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001112731 |
Protein GI | 134299235 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000031441 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGTAG GCCCATTGGA CATAAATTTT ATCATAAAAA TTCTACCCAA TTTATTATTG GGAGCTGTCA TGACAATTAA GTTAACTTTT TTTGCCATTA CCTTTGGGAC CTTAATTGGT TTGCTTGTCG CCCTAGCTAA AATTTCCAGC TTTAAAATAT TACGTTGGTT TGGGGGACTC TACACCTGGG TTATCCGTGG TGTCCCCCTT CTTCTTCAAC TAATGTTTTT ATATTATGGC CTACCCTTTA TGGGACTTAC TCTGAATGAA TTTACCGTGG CTGTCATTGG TATGTCTGTG TGCGGCGGTG CCTATATTGC AGAAATTATG CGGGCCGGTA TTCAGTCCAT TGATAAAGGT CAGATGGAAG CAGCACTTTC CATGGGTATG ACTTACCCCC AGGCCATGCG CCGGGTTATT CTTCCCCAAG CATATAAACG CCTGCTTCCT CCAATGGGTA ACGAATTTAT TACATTAATG AAAGACAGTG CACTGGTCTC TGTTATTTGT ATGACTGAAC TATTAAGGGC AGCTAACCTG TTGCAAAACG CTACTTTTCG TCCCATTGAG ATTTATGTTG TTGCAGGACT CCTTTATCTG ATAATGACAA CTTTCTTTAC AATGGTGGTA AACCGCTTGG AAAAAAAATT AGCGGTCTCC GAAGGTGATT AG
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Protein sequence | MHVGPLDINF IIKILPNLLL GAVMTIKLTF FAITFGTLIG LLVALAKISS FKILRWFGGL YTWVIRGVPL LLQLMFLYYG LPFMGLTLNE FTVAVIGMSV CGGAYIAEIM RAGIQSIDKG QMEAALSMGM TYPQAMRRVI LPQAYKRLLP PMGNEFITLM KDSALVSVIC MTELLRAANL LQNATFRPIE IYVVAGLLYL IMTTFFTMVV NRLEKKLAVS EGD
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