Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1359 |
Symbol | |
ID | 4956731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1457108 |
End bp | 1459531 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640180538 |
Product | peptidase S16, lon domain-containing protein |
Protein accession | YP_001112718 |
Protein GI | 134299222 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGAAA GTGTATATTT CAGAAAAAGG GGGTGGAGGG TTTTTATGGA ACTTAAGAAT ACCATTTTAA ATTCAAGTCG TCTGCGTCGA CGCTGCCAAA CGGACGAATT AGGGTTTTGT AGTACTTCTG CTGATGTGCC GCCCTTAAAG GATTTTATTG GTCAGGAGCG GGCTGTACGG GCCATGCAAT TTGGTCTAAG TATGCAGGCC TATGGGTACA ATATTTTTGT GGCCGGGCCA GCTGGAACCG GGAAAACTAC CTATACGCAA ACCGTGGTTC ATCAGGCAGC TATCAGAGGG GAGATTCCCG GTGATTATTG TCTTCTATAC AATTTTCAAA ACCCGGATGT TCCTTTGGCT GTTATCCTGC CCCCAGGCAG GGGAATTAAA TTTCAACGGG ATATGACCCA TCTGACAGGG CAGATGAAGG TTGCCATTAA TAGGCTTTTT GAAGGTAAAG ATTACATTCA GAGAAAAAAT ACTATTATTC AGGAAAAGCA GCAGGAGCTA GATAATGATG TCAATCGTTT AAGAGAAAAT GCTGCGTCAC TGGGTTTTGT AATGAAAGTT AATGAACAGG GGATTGCTTT TTTACCCGTA AAAGATGGAA AAACCCTATC AAAGGAACAG TATAATGAGT TAACCAGTGA AGAAGTTTTC TCTTTTGAAG AGCGATTGAA GGTGCTCCAG GATCGAACGG AGGAAATTGC CTTTAAAAGT AAAGAATTGG AGAAAGAAGC AGACCGGGTG GTAAGGGAAT TGGATCAACA GTTAATATTG GAAACCACGG TCCCGTTGGT GATGAAGCTA CAGGAGAAAT ACCAGGAATA TACTAAGATT GTTTGCTACC TCCATGATCT GGTGAAACAT TTAACTGAAA ATATTGGCAG TTTAGCGAAT CGGGAAAACC AGGAAAAAGA AAAAGTACAG AATGATTTAT TTACACTTTA TTGTGTACAT TTACTGGTTA ATCATACAGA TACCACAGGT GCCCCTGTGG TTGTTGAAAC AAATCCCAAC TACTACAATT TGTTTGGTAA AATTGAATAT CGAAGTCAAA TGGGTACTGT GAACACTGAC TTTACCATGA TTAAACCCGG AGCCATTCAT AGGGCAAACG GAGGGTATCT TATTGTCCAG GCAAAGGATT TATTGACTGA TCCCAACTCC TGGGAAACTT TAAAAAAAGC CCTAAAAAAC CGGCAGGTGA TTATTGAAAA CATTGGCGAG CAGTATCGCT CAGTACCAAC CATTAGCCTG AGGCCGGAAC CCATTCCTCT GAATGTGAAG GTTATTCTTA TTGGATCCCA GAGGATCTAT CAATTGCTAC AGCATGCGGA TGAAGACTTT GAAAAACTTT TTAAGGTAAT GGTGGATTTC GAGGTAGTGA TGCCACGTAC ACCGGATAAC CTAAGAAATT ACGTAGCCTT TGTGGGGTCG GTGTGCCGTA AAGAAGGACT ACTTCATTTT GACAAATCAG GCTTAAGTGA AATCATTGAG TACGGTTCTC GATTGGCGGC TAACCAAAAT AAGTTATCAA CCCAATTCAA CGAAGTTGTA GAAATAATTC TTGAGGCATC GGCCTGGGCC CAAACAAATG GAGCCCCGTT AGTGGGGGCA GAGCATGTAC GTCAGGCCAT TAATGAAAAA CTTTATCGGT GCCGCCGGGT AGAAGAACGC CTGCAAGAAT TAATTCTGCG GGATAAAATT CTAGTGGATA CCGATGGAGC AGTGGTGGGG CAGGTCAATG GCCTGGCAGT TCTGGATGTG GGAAACTATG TCTTTGGTAA ACCCTCTCGT ATTACAGCCA AAACCTATAT GGGACAGGAA GGGCTAATTA ATATTGAAAG GGAAACACAA ATGAGTGGCA GCATCCACTC CAAGGGGGTT CTCACTTTAA CCGGTTATCT GGGCGGTATG TTTGCCCAAA ATAAGCCCCT TTGCTTGTCG GCCAGCATCA CCTTTGAGCA GTTGTATGAA GGGGTAGAAG GGGACAGCGC TTCCAGTGCG GAACTTTATG CGTTACTTTC CAGCCTATCT GGTATTCCCA TCAGACAGTA TCTGGCAGTC ACTGGATCAG TAAACCAAAA TGGGGAAATC CAACCCATTG GGGGGGTTAC TGAAAAAATA GAAGGATTCT TTGGTGTTTG TCAAGCCAGA GGATTAACGG GAGAACAGGG AGTGATTATA CCCGTTCAGA ATATAGATAA TCTGATGTTA AACCATGAGG TATTGGAGGC AGTGGAGAAG GGTATCTTTC ATATTTATGC TATTTCCCAG GTTGAGGAGG GTATTGAGCT TCTTACTGGA ATGCCTGCAG GAGAGCTTCA GGCCGACGGT AGTTACCCGA AAGGAACAAT ATTTCAACTA GTCGATGATA AACTAAAACA ATATGCTCAG GGAATTAGTG AGTTTGCTAA ATAA
|
Protein sequence | MKESVYFRKR GWRVFMELKN TILNSSRLRR RCQTDELGFC STSADVPPLK DFIGQERAVR AMQFGLSMQA YGYNIFVAGP AGTGKTTYTQ TVVHQAAIRG EIPGDYCLLY NFQNPDVPLA VILPPGRGIK FQRDMTHLTG QMKVAINRLF EGKDYIQRKN TIIQEKQQEL DNDVNRLREN AASLGFVMKV NEQGIAFLPV KDGKTLSKEQ YNELTSEEVF SFEERLKVLQ DRTEEIAFKS KELEKEADRV VRELDQQLIL ETTVPLVMKL QEKYQEYTKI VCYLHDLVKH LTENIGSLAN RENQEKEKVQ NDLFTLYCVH LLVNHTDTTG APVVVETNPN YYNLFGKIEY RSQMGTVNTD FTMIKPGAIH RANGGYLIVQ AKDLLTDPNS WETLKKALKN RQVIIENIGE QYRSVPTISL RPEPIPLNVK VILIGSQRIY QLLQHADEDF EKLFKVMVDF EVVMPRTPDN LRNYVAFVGS VCRKEGLLHF DKSGLSEIIE YGSRLAANQN KLSTQFNEVV EIILEASAWA QTNGAPLVGA EHVRQAINEK LYRCRRVEER LQELILRDKI LVDTDGAVVG QVNGLAVLDV GNYVFGKPSR ITAKTYMGQE GLINIERETQ MSGSIHSKGV LTLTGYLGGM FAQNKPLCLS ASITFEQLYE GVEGDSASSA ELYALLSSLS GIPIRQYLAV TGSVNQNGEI QPIGGVTEKI EGFFGVCQAR GLTGEQGVII PVQNIDNLML NHEVLEAVEK GIFHIYAISQ VEEGIELLTG MPAGELQADG SYPKGTIFQL VDDKLKQYAQ GISEFAK
|
| |