Gene Dred_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1259 
Symbol 
ID4957587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1331056 
End bp1332321 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content41% 
IMG OID640180430 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_001112618 
Protein GI134299122 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.027448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATGATA TAAAAACCAC CATTGAGGAA CGGGCTGTAT TAGTAGGCGT TAAATTACCA 
GGTTTTCATG AGCATCAAAT TTGTCAGTCA TTGGATGAAT TAGCAAATTT GGCAAGTACC
GCCGGGGCGG ATGTGATGGG GACGTTTATG CAGAGTCGCC AATATCCTGA TTCTGCAACC
TTTATTGGTA AAGGCAAGGC TCAGGAATTG GCAGAATATT GTCGAGAAAT CCATGCCAAT
ATGGTTGTTA TAGATAGGGA ACTGTCACCA GCCCAAGCTC GTAACTTGGA AGATCGTCTA
GGGGTCAAGG TGATAGACCG TACACAATTA ATTTTAGATA TTTTCGCTCG AAGAGCCCAA
ACCAGAGAGG GAAAATTACA AGTAGAACTA GCTCAACTTA AATATCTGTT ACCACGTTTA
ACGGGTCTTG GAACCCAGTT ATCACGGTTG GGAGGAGGTA TTGGAACCAG GGGGCCTGGT
GAAACCAAGC TAGAGGTTGA TAGAAGGAGA ATAAGAAAGC GCATATCGGA TCTTGAGCAG
GAACTGAAGG AAGTACAACG CCATAGGAGC TTACTAAGGA AAAGTCGAAA AAGTGAGCCT
TTACCAATTG TTAGCCTTGT TGGTTATACA AACGCTGGCA AAAGCACGTT ATTAAAATCC
CTTACAGGGG CAGACATATT GGTGGAGGAT AAACTGTTTG CAACCCTTGA TCCCACCACA
CGGCGTATTT CCTTGCCTAA CAATGACAAT GTTTTACTAA CAGATACAGT TGGATTTATT
CAAAACTTAC CCCACCACTT GGTTGCTGCT TTTCGTGCTA CACTGGAAGA AGTGCAGGAG
TCAGATTTGC TGTTACATAT TGTTGATGCC TCCCACCCAA ACTACGAAGG TCAAATTCGC
GCGGTAGAAA CTGTATTGGA ATCACTTCAT GTACTGGATA AGCCTTCAAT AATGGTCTTT
AACAAAATAG ACATGGTAAA AGATGTACAG GAAATTCCCT TTACGGAAAA CCCAAGGGTG
TATATTTCCG CAACTTCCGG TGAAGGCAGT GATCAACTTC TAGATATGAT AGCTGGTGTT
TTGAAGGAAA GATATTCTAT ATTAAAACTA ACAGTACCCT ATGATAAAAC AAATCTAATA
TCAATTCTTC ACCAAAAAGG AAAAGTTTTA AATGAAAAAT ATACACCGGA GGGAATTGAA
ATTAAAGCAG AGATTAGTAA TATATGGGCT GCAAGAATTC GAAAAATTTT CTCTAAAAAC
ACCTAG
 
Protein sequence
MHDIKTTIEE RAVLVGVKLP GFHEHQICQS LDELANLAST AGADVMGTFM QSRQYPDSAT 
FIGKGKAQEL AEYCREIHAN MVVIDRELSP AQARNLEDRL GVKVIDRTQL ILDIFARRAQ
TREGKLQVEL AQLKYLLPRL TGLGTQLSRL GGGIGTRGPG ETKLEVDRRR IRKRISDLEQ
ELKEVQRHRS LLRKSRKSEP LPIVSLVGYT NAGKSTLLKS LTGADILVED KLFATLDPTT
RRISLPNNDN VLLTDTVGFI QNLPHHLVAA FRATLEEVQE SDLLLHIVDA SHPNYEGQIR
AVETVLESLH VLDKPSIMVF NKIDMVKDVQ EIPFTENPRV YISATSGEGS DQLLDMIAGV
LKERYSILKL TVPYDKTNLI SILHQKGKVL NEKYTPEGIE IKAEISNIWA ARIRKIFSKN
T