| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1255 |
|---|
| Symbol | |
|---|
| ID | 4957882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1327436 |
|---|
| End bp | 1328086 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640180426 |
|---|
| Product | flavin reductase domain-containing protein |
|---|
| Protein accession | YP_001112614 |
|---|
| Protein GI | 134299118 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAAA AGAGTTGTCA AGTCTACTTA TGGAGATGTT CATTTTGTGG AAAAAAAGCT
TATGGAAAAA AGCCGCCTAT AAGCTGTAAT AAGTGTTTTA GTGAAGCCAA TCGGTATATT
CTTATTCCTA AAAAAGAAGC GGACATTGAG GTTCCCAACC TTGAGAAGTT TTTCGGTATG
CCTGGTTTAA ACAATTTTTT GTATTTAGTG GGTTCAACAC TTGATGGAAG GCCTAATGCC
ATGTGTTGCA GTAGTGTAAC GCAGATTAGT TTTTGTCCTG CCAGAGTTGC TGTGGCGGTA
AATAAGAATA ACCTAACCCA TGATTTTATA AAAGAAAGTG GAGTTTTTTC CCTTTCTCCC
CTTACGCAAA GCCAAGGTAA AGTGGCTCAT TTTTTTGGCC GAAACTCTGG GAGACAGGTT
AATAAATTTG AGCAGTATCA TTATAGATCC GCAGTTACAG GGAGTCCGAT TATTGAAGGT
AGTTTTGGTT ATTATGACTG TGAAGTTGAG CATAGAGCCA CAGTAGAGTT AGATAGCCAT
ACTTTGTTTG TGGGAAAAAT AATAGATGGG TCATTAAATT CAAATGAACT ATTTTTAACT
TATTATGATT ATAAGCGAGA ATATTTAGCC CCTAGGCATA ATATAACCTA A
|
|---|
| Protein sequence | MSQKSCQVYL WRCSFCGKKA YGKKPPISCN KCFSEANRYI LIPKKEADIE VPNLEKFFGM
PGLNNFLYLV GSTLDGRPNA MCCSSVTQIS FCPARVAVAV NKNNLTHDFI KESGVFSLSP
LTQSQGKVAH FFGRNSGRQV NKFEQYHYRS AVTGSPIIEG SFGYYDCEVE HRATVELDSH
TLFVGKIIDG SLNSNELFLT YYDYKREYLA PRHNIT
|
|---|
| |