Gene Dred_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1240 
Symbol 
ID4957871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1314261 
End bp1315109 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content45% 
IMG OID640180411 
Productglutamate racemase 
Protein accessionYP_001112599 
Protein GI134299103 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACA GCATTTACCA ATCATATCTA GAGGTGATTT TTTTGTCTCA GCGGGCACCC 
ATAGGTGTAT TTGACTCAGG TGTAGGTGGA TTATCAGTGG CCAGGGATAT CCGCAAGCTT
CTTCCTCTGG AGGATATTAT ATATTATGCT GATTCAGCAT ACTGCCCTTA CGGGGACAAA
GATCCCCAAA CAATCCGACA GCGTGAAAAA GCAATCGGCG AGTTTTTAGT TTCCCAAGGC
TGCAAATTAA TAGTAGTTGC CTGTAACACC GCTTCTTCTG CGGGCTTGGA ATATCTACGT
CGATTTTTAA AAGTTCCAGT AGTTGGTATG GAACCGGGTG TTAAACCGGC AGTAGCTGCA
ACACGCAATG GTAAAATTGG TGTGCTGGCC ACCTGTGTAA CCATTGCCGG TGATCGCTTT
TCCTCTCTGG TTAAGCGATA TGCAGAGGAA ACTGAGGTTA TCACCCAACC CTGCCCAGGA
CTTGTGGAGT TAATTGAGTC TGGGAAACTG AATGCACCGG AAACAGAAGA AAAACTGAGA
ACCTTTCTGC AGCCAATACT GGATAAAAAA GCTGATACCA TTGTTTTAGG CTGTACCCAC
TATCCCTTTT TACGCCCAAT GCTTGAAAGT CTGGCGGGTC CTGGGGTCTC TGTTATCGAC
ACTGGTCAGG CAGTGGCCAA ACAGGTGAGC AGGGTATTAA GCGCATGTAA TTTAGCAAAG
AATAGTGGTC CCCTTGGAAC AGAACAATTT TACACCAGTG GAAATCAAAC TGAAGTTGAA
GAAGTTATAC GTACCCTCTG GCTTCGGGAT AATATAAGCG TTAAAACCTT GCCTCTAAAC
GTTAAATAG
 
Protein sequence
MNYSIYQSYL EVIFLSQRAP IGVFDSGVGG LSVARDIRKL LPLEDIIYYA DSAYCPYGDK 
DPQTIRQREK AIGEFLVSQG CKLIVVACNT ASSAGLEYLR RFLKVPVVGM EPGVKPAVAA
TRNGKIGVLA TCVTIAGDRF SSLVKRYAEE TEVITQPCPG LVELIESGKL NAPETEEKLR
TFLQPILDKK ADTIVLGCTH YPFLRPMLES LAGPGVSVID TGQAVAKQVS RVLSACNLAK
NSGPLGTEQF YTSGNQTEVE EVIRTLWLRD NISVKTLPLN VK