Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1234 |
Symbol | |
ID | 4958607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1308934 |
End bp | 1310247 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640180405 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_001112593 |
Protein GI | 134299097 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAGAA TAGTATATTG TTCTCTGTGC TCTGCCTTGA TACTAGTGCT TTTAATATTG TGTTCTTACC CCGTTGAAAC TGGCTTATAT ACATTTGCCA ATAACCATAA CTCTATTCAA GTTAGAGGTA GTCTAGGAGA GGGTGCTACT GCTTTAACCT ATGCACCTGG TATTTGCAAT CCGATTAACC TTACTGCCAA GGGAGCCATC CTGGTTAATC AGGATACCGG ACAAGTAATA TATGCTGATC AGGAACACCA GCCCTTTCAC CCGGCATCGA TAACCAAACT TATGGTCCTT TACATTTTGT TAGAAAATAT CCATAATGGG GTTCTTCATT GGGAGGACCC TGTACAGGCC AGTAAAAAAG TTGAGAGAAT TAATGAGGCT CAGATTTATT TGAGAGAGGG GGAGGTCCTC AGTCTAGAAG AAATGATAAA AGCCATGGTT GTGGCTTCCG CCAATGATGC TGCTGTGGCC CTTGCCGAAA GAGTGGCGGG CAGTGAAGCG GCATTTGTAG AGATAATGAA TGCTAAGGCC CTAGAATTAG GGCTGAGGAA TAGTCACTTT ATTAATGCCT CAGGTTTGCC AGCGTCCAAT TCGTATAATC ATTATATGTC TGCCTATGAT ATTGCTCTCC TCGCTAAGTA TTTGTTAGAA GAATACCCCG AAGTACTGGA GTTTTCCAGA TTAACTACCA CAACAATTCG GAACGGAAGT TTTCCAATCG CCAATACCAA TAGTCTATTA GGGATTTTTC AGGGGATGGA TGGTTTAAAA ACAGGTTATA CAGACCGGGC CGGTTGGTGT TTAGTGGCAA CTGCCCAACG AAATGGTCAG CGTATGATCA GTGTGGTCCT TGGTTCACCC TCCAATGAGA TTAGAAAAGC AAATACCACT GCATTGTTAA ATTATGGGTT TCAGCATTAT CAAAGGGTGA ATAATATTTA TGTAAATGGG ATTAAGTGCA ATTATATTCA GTCCCCTCTG GCTGTTGATG GAACTGTGTT AGTACCAATC AATATTCTGA GTGATACCAT GGGTCTAAAG GTACAGTACC AAAAAGAAAA AATCTTCCTT AGTGGGTGGG GGACCCAAGT AGAATTTCAG GTAGACTCCG ATAAGGCTAT CTGGAGTAAC AAAGCTATAA AGTTACCTCA ACCAGTACAA AAGGTAAAGG GTACCATAAT GGTACCTGTC AGATTTATTA GCCAGATCTT TGGGGCAGAT GTACAATGGG ATGGGAAAAA GAAAAGCATT CATATTTATA CAGAAATGCA TAGGACATTG GGGGAAAACA GACTTATGTT TTAA
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Protein sequence | MPRIVYCSLC SALILVLLIL CSYPVETGLY TFANNHNSIQ VRGSLGEGAT ALTYAPGICN PINLTAKGAI LVNQDTGQVI YADQEHQPFH PASITKLMVL YILLENIHNG VLHWEDPVQA SKKVERINEA QIYLREGEVL SLEEMIKAMV VASANDAAVA LAERVAGSEA AFVEIMNAKA LELGLRNSHF INASGLPASN SYNHYMSAYD IALLAKYLLE EYPEVLEFSR LTTTTIRNGS FPIANTNSLL GIFQGMDGLK TGYTDRAGWC LVATAQRNGQ RMISVVLGSP SNEIRKANTT ALLNYGFQHY QRVNNIYVNG IKCNYIQSPL AVDGTVLVPI NILSDTMGLK VQYQKEKIFL SGWGTQVEFQ VDSDKAIWSN KAIKLPQPVQ KVKGTIMVPV RFISQIFGAD VQWDGKKKSI HIYTEMHRTL GENRLMF
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