| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1200 |
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| Symbol | |
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| ID | 4958258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1277449 |
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| End bp | 1278120 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640180370 |
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| Product | thymidylate synthase, flavin-dependent |
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| Protein accession | YP_001112559 |
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| Protein GI | 134299063 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.001686 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGGTAA AACTGATTAA CTATACACCT AATCCGGAGG ATGCAATAAT TAAAGCTGCT
GCTAACTGCT GGCAGTCAAC GCCAAGGGAT GAAATATTGG ATTTAATAAT AAAGGCCGGG
CACTTAACTC CGTTAGAGTT TGCGACTTTT AATTTTGAGG TGTCAGGCGT TTCCCGAGCG
CTTACTCACC AGCTAGTTAG AAAACGTGTG GGGGTTGGAT TCGCCCAGGA GTCACAAAGG
TATGTAAAAT ATAACGAGAA CGGATTTGAA TATGTAACAC CTCCAAGAAT TCAGAATTGC
GATAAAAGTA TTTTATACAT TGACAAAACG GCGCATCAAA TTTACCAACA GGCAATGTTT
ATCATCCAGG TCGCCTATGA GCAGCTAGTC GATATAGGAA TACCGGCTGA GGATGCAAGG
TTTGTTTTAC CCAACGCCTG CTGTTCAAAA ATCCATGTAA CAATTAATTA TCACGCACTG
TTTGATTTGG CAAAGGAGCG GCTCTGCGAT AAGGCCCAAT GGGAAATAAG AGAACTTGTG
GCGGGGATGA AAAAAGAGGT TCAAGAAATA AGTACTACAT TGGCCGGGTA CCTACAACCA
AAATGCTACT GGCTGCAAAG ATGCCCAGAG AAACGATCAT GTGGTAAGGT GGGGTTTCTC
TGTGAGAAGT GA
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| Protein sequence | MQVKLINYTP NPEDAIIKAA ANCWQSTPRD EILDLIIKAG HLTPLEFATF NFEVSGVSRA
LTHQLVRKRV GVGFAQESQR YVKYNENGFE YVTPPRIQNC DKSILYIDKT AHQIYQQAMF
IIQVAYEQLV DIGIPAEDAR FVLPNACCSK IHVTINYHAL FDLAKERLCD KAQWEIRELV
AGMKKEVQEI STTLAGYLQP KCYWLQRCPE KRSCGKVGFL CEK
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