Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1142 |
Symbol | |
ID | 4957745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1214415 |
End bp | 1215344 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640180311 |
Product | pseudouridine synthase |
Protein accession | YP_001112501 |
Protein GI | 134299005 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGAAA GATTACAAAA AATATTGGCA AAAGCGGGAG TGGCTTCCCG TCGCCATTCT GAAGAATTAA TTATCAGTGG TCAAGTTAAA GTTAATGGCA AAACAGTTAC AGAAATGGGA TTAAAAGTAG ATCCAACAAA GGATAAAATT GAAGTAAAGG GGAAACCCCT TCCTCCACTG GAAAAAAAGG TTTATTTACT GATGAATAAA CCCAGGGGAT ATGTAACGAC CCTTAGTGAT GAAAGGGATA GAAAAACTGT TGTTGATTTA CTAAAAGGGG TAGAACAAAG GGTATATCCC GTAGGACGGC TGGACTACGA TTCAGAGGGA TTGCTTCTGT TGACCAATGA TGGAGAGCTA ACCCAGGCCC TTACCCATCC TAAACATAAG GTCAAAAAAA CCTACTTGGC GAAGGTGGAT GGCATACCTG AAACAGAGGA ACTAAAAGCA ATGGCCAAAG GCTTGGTGTT GGAAGATGGA CCCACAGCAC CGGCTGATGT AAGGCTTGCA GGCACTGGGG ATAACAGGGC TTTACTGGAG ATTTCCATTC ACGAAGGCCG CAATCGTCAG GTAAGGAGAA TGTGTGAGCA TATTGGTTAT AAAGTTCTTC GATTAAGAAG GACCCGTATA GGGACCCTTG AACTGGGTAG CTTAAAATCA GGTGAGGTAC GGGCATTAAC CAAGAAGGAA TTAAGGGAGC TAGCCTCATT GGTGGGGTTA AAGCAAAATT ATAATGATAT GCAGCTTACC ACCGAGGTTC AGAAGAAAAA GCCCAGCCCC TGCGGCAGGG TTGGCCGAAT CAAAGGAAAG GTCTCCGAGC AAAAAAGTAA TAGGTCTGCA AAGTCAAAGG TTAACGAATT TTTTGAAAAA GGGACATTAA GGGGTAAAAA TAGTAAAAGT AAGGTTTCCA GCAGAGAGAG TAGTAGATAG
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Protein sequence | MEERLQKILA KAGVASRRHS EELIISGQVK VNGKTVTEMG LKVDPTKDKI EVKGKPLPPL EKKVYLLMNK PRGYVTTLSD ERDRKTVVDL LKGVEQRVYP VGRLDYDSEG LLLLTNDGEL TQALTHPKHK VKKTYLAKVD GIPETEELKA MAKGLVLEDG PTAPADVRLA GTGDNRALLE ISIHEGRNRQ VRRMCEHIGY KVLRLRRTRI GTLELGSLKS GEVRALTKKE LRELASLVGL KQNYNDMQLT TEVQKKKPSP CGRVGRIKGK VSEQKSNRSA KSKVNEFFEK GTLRGKNSKS KVSSRESSR
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