Gene Dred_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1104 
Symbol 
ID4957057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp1175350 
End bp1175796 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content44% 
IMG OID640180274 
Productanti-sigma F factor 
Protein accessionYP_001112464 
Protein GI134298968 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID[TIGR01925] anti-sigma F factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.860331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAC TAAATAGCTG CTCAATTGAA TTTACCAGTA TACCTGAGAA TGTAGGATTT 
GCCCGGGTGG CCATAGCCGC CTTTGCCTCA CAATTGGAAT GCACACTACC AGAGCTTGAA 
GAAATAAAAG TAGCAGTCTC GGAAGCTGTG GGAAATTCGA TCTTACATGG CTATCGAAAT 
CAACAGGATA AAAAAGTTCT AGTAACGGCA AATATCTATA AAGAAGGATT GGAGATTCAA 
GTATCGGATG AGGGCGTTGG TATTGCCGAT ATTAATCTTG CTATGCAGCC GGCTTATTCC 
ACAGATCCGG AAAGAATGGG CCTTGGCTTT GTATTTATGC AATCCTTCAG TGATCGTATG 
CAGGTGGACT CAACACCGGG AAAAGGTACT ACTGTGACGA TGTTTAAACA AATTGGTATG 
CGTGGTGCCC GGGTGCGGGC CAACTAA
 
Protein sequence
MKLLNSCSIE FTSIPENVGF ARVAIAAFAS QLECTLPELE EIKVAVSEAV GNSILHGYRN 
QQDKKVLVTA NIYKEGLEIQ VSDEGVGIAD INLAMQPAYS TDPERMGLGF VFMQSFSDRM 
QVDSTPGKGT TVTMFKQIGM RGARVRAN