Gene Dred_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1064 
Symbol 
ID4955491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1136045 
End bp1137949 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content46% 
IMG OID640180234 
Productpyruvate carboxylase subunit B 
Protein accessionYP_001112424 
Protein GI134298928 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein
[COG5016] Pyruvate/oxaloacetate carboxyltransferase 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein
[TIGR01108] oxaloacetate decarboxylase alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000214042 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCATC ATTTAAAAAT TACCGATACA ACATTACGTG ACGCACACCA GAGTCTGTGG 
GCAACCCGTA TGGCCACGGA AGACATGTTG CCCATTTTGG AAAAATTAGA TCAAATGGGG
TATCACTCCT TAGAAGTGTG GGGCGGAGCA ACCTTTGATG TTTGCCTGCG CTTTCTGAAC
GAAGATCCCT GGGAACGTCT TCGGTTGATT AGGAAGTACG TTAAAAACAC CCCCTTACAA
ATGCTACTCC GAGGACAGTC TCTGCTGGGA TATATGCATT ACCCTGACGA TGTGCTGGAA
GCATTTATTC ATAAAACCGT GGAAAACGGT ATGGATATCA TCAGAATTTT TGATGCTTTA
AACGATATTC GAAATATGGA AAAGGCGATT CAAGCCACCA AGGCTGCCGG GGCCCATGCC
CAGGCAACGG TGGTCTATAC CGTAAGCCCG GTGCATACAA CCGAACACTA CCTGGAAACT
GCCCTGCGGC TGGAGGAAAT GGGTGCTGAT TCTATTTGTA TAAAAGATAT GGCCGGCCTT
CTGGCACCTT TTAAATCTTA CGAATTAGTT AAATTATTCA AAGCCCATTT ACAGGTACCT
GTGCAATTGC ACTGTCACTA TATTGGTGGT ATGGCAGTGG GAGCTTATCT AAAGGCCGCA
GAGGCTGGTG TAGATGTGGT GGACACTGCT TCGGTTCCCA TGGCCTTTGG TGCTTCGCAG
CCACCGGTAG AAACCGTTGT AAGGGCCCTG AAAGGAACCC CCTATGATAC TGGACTAAGT
ATGAAGGCAC TGTTTGAAGT GGCTCAGTAT TTTGAAGATA TTCGCAAAGT GCTGGGACAG
CAACGGGGTG TAACACGCAT CAGTGACATG CGGGTGTTTG AACATCAGGT CCCTGGTGGT
ATGATTTCCA ACCTAGTGTC CCAGCTAGAG GAGCAAAAGG CGCTGCATCG GCTGGATGAG
GTTTTGGAAG AAATTCCTAG GGTGAGAGAA GAACTGGGCT TCCCGCCGCT GGTAACACCC
ACCAGTCAAA TTGTTGGAAC CCAAGCTGTT TTAAATGTCT TAACCGGGCA ACGGTACAAA
TTAATTCCCG GTGAAGTAAA ACTTTATGTT GAGGGCTACT ACGGCCAACC CCCGGCCACC
ATTGATCCTT CGGTTAGTCG CAAGGTCCTA GGGGATAAGG AAGCTATCAG CTGCCGACCC
GCTGACTTAT TAGAACCCAA ACTGGATAAA CTAAGAGATG AGATTAAGGA TTTAGCCATT
AGCCAAGAGG ATATATTAAG CTATGCTATG TTCCCCCAGG TAGCACGCAA ATTTTTTGAA
GCGCGCAAAA GAGGAGAAAC AGGTCCACAG AGGAAGGAAG CTTCGATTAA ACCAGGGGCG
CCTGCCGATT TTAGTGGCAC CAAGAGTACC AAGGAGGCTA AGAACGTGAA CCTTAGTGAA
TTAAAAGAAC TAATTAAGGT ATTAGATCAA ACAGATATTA CAGAAATAGA CCTGGAGAGT
GATGGTGTTA AAGTATCCAT CCGTAAAGGT GGAAAAGTGT CTGCCACTGT AACACCTGCG
GCACCACAAA AGACAGCGGA AACACCGGTG ACTGAAGCAC CTAAAACAGG TGAAGCTTCT
GTGGCACCGG AAGTTCCTGT GGTTTCAACC CAGCCCACAG AGGATTTAAT CCCTGTTACC
GCACCGATGG TGGGTACCTT TTATAGAGCA CCATCTCCGG ATGCCGACCC CTTTGTTAAC
GTAGGAGATA TTGTAGAAAA GGGTCAAACT CTTTGTATTG TTGAAGCTAT GAAATTAATG
AACGAAATTG AAGCAGAGCA AGCTGGTGAA ATTGTCCAAA TCATGGTGGA AAACGGCCAG
CCCATTGAAT ACGGACAAAA TCTCTTCATG ATTAGAAAAA AGTAG
 
Protein sequence
MSHHLKITDT TLRDAHQSLW ATRMATEDML PILEKLDQMG YHSLEVWGGA TFDVCLRFLN 
EDPWERLRLI RKYVKNTPLQ MLLRGQSLLG YMHYPDDVLE AFIHKTVENG MDIIRIFDAL
NDIRNMEKAI QATKAAGAHA QATVVYTVSP VHTTEHYLET ALRLEEMGAD SICIKDMAGL
LAPFKSYELV KLFKAHLQVP VQLHCHYIGG MAVGAYLKAA EAGVDVVDTA SVPMAFGASQ
PPVETVVRAL KGTPYDTGLS MKALFEVAQY FEDIRKVLGQ QRGVTRISDM RVFEHQVPGG
MISNLVSQLE EQKALHRLDE VLEEIPRVRE ELGFPPLVTP TSQIVGTQAV LNVLTGQRYK
LIPGEVKLYV EGYYGQPPAT IDPSVSRKVL GDKEAISCRP ADLLEPKLDK LRDEIKDLAI
SQEDILSYAM FPQVARKFFE ARKRGETGPQ RKEASIKPGA PADFSGTKST KEAKNVNLSE
LKELIKVLDQ TDITEIDLES DGVKVSIRKG GKVSATVTPA APQKTAETPV TEAPKTGEAS
VAPEVPVVST QPTEDLIPVT APMVGTFYRA PSPDADPFVN VGDIVEKGQT LCIVEAMKLM
NEIEAEQAGE IVQIMVENGQ PIEYGQNLFM IRKK