| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1056 |
|---|
| Symbol | |
|---|
| ID | 4955446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1130559 |
|---|
| End bp | 1131572 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640180226 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001112416 |
|---|
| Protein GI | 134298920 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3854] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02858] stage III sporulation protein AA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0117191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTT TGAGACAAGT TCATGTTTTG GATACAAGCA AGGGCTTGCC CTTGGATGAA
GTACTAAAGT TATTTCCCCC AAATCTACGC CAAATGCTGA CCGAACTTCC CCTGCCCATT
AAAGAAGAAG TGGAGGAAAT TCGAATTCGA CAGGGACGGC CCTTAATGCT GGGACTGGCC
CAGGGGGATT GCTTTGTAAA TGATCAGGGC TCTGTGTCTG CTAAGGCCAC GGAGGCCTAT
ACCATTAATA ACCTTGATGT AGAGCGGATA ACTCAACTGG TGAGCCGAAG TTCCCTCTAT
GCCTTGGAGG AAGAACTGAG GAATGGTTAT ATTACGCTGC CTGGTGGACA CAGGGTTGGC
ATTACCGGTA AAGTCCTAAC TGACCAGGGA GGAATTAGAA ATATTAAGTA TATTTCCGGC
TTTAATTTCC GAATTTCAAG GGCAGTGGTA GGTGTGGCAG ATAAGGTTTT GCCTTACCTC
ATTTCTTCGG ACGGTCGATT TTATCATACC ATACTGGTGT CGCCGCCCCG CTGTGGTAAA
ACTACGATGT TAAGAGAGAT CATTCGCAGA CTCAGTGAAG GGGTGCCAGA ATTAGGTTTT
TCGGGTGTCA CTGTGGGTGT GGTGGACGAG CGTTCGGAAA TTGCCGGTTG TTATCGGGGT
GTTCCCCAGA GGGACATCGG CCCTAGAACT GATGTTTTAG ATGCCTGTCC TAAGGCTCCG
GGTATGATGA TGTTGCTGCG TTCCATGGGT CCAATGATCA TAGCTACCGA TGAAATTGGA
CGACAGGAAG ATGTGGCAGC CTTGGAAGAG GTACTAAACG CAGGCGTTAA GGTACTGAGT
ACGGTCCATG GCGCAACTCT GGAAGAATTG GCAGACCGCC CAGCTCTACA ATATCTCTTT
AGGATTAAGG CTATCCAAAG GTTTATTATA CTGGGTCGGT CCCGGGGGGT GGGGACCGTA
GAAGACATCA TTGACGGCCG GACCATGAGG TCGTTGGGGG TGAAACCATG TTAA
|
|---|
| Protein sequence | MSVLRQVHVL DTSKGLPLDE VLKLFPPNLR QMLTELPLPI KEEVEEIRIR QGRPLMLGLA
QGDCFVNDQG SVSAKATEAY TINNLDVERI TQLVSRSSLY ALEEELRNGY ITLPGGHRVG
ITGKVLTDQG GIRNIKYISG FNFRISRAVV GVADKVLPYL ISSDGRFYHT ILVSPPRCGK
TTMLREIIRR LSEGVPELGF SGVTVGVVDE RSEIAGCYRG VPQRDIGPRT DVLDACPKAP
GMMMLLRSMG PMIIATDEIG RQEDVAALEE VLNAGVKVLS TVHGATLEEL ADRPALQYLF
RIKAIQRFII LGRSRGVGTV EDIIDGRTMR SLGVKPC
|
|---|
| |