Gene Dred_1050 details

Gene Information

• Locus tag: Dred_1050
• ID: 4955394
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 1124110
• End bp: 1124553
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640180220
• Product: 3-dehydroquinate dehydratase
• Protein accession: YP_001112410
• Protein GI: 134298914
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0757] 3-dehydroquinate dehydratase II
• TIGRFAM ID: [TIGR01088] 3-dehydroquinate dehydratase, type II

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000995076
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTC TTGTATTGCA TGGTCCAAAT TTAAATCGAT TGGGCAAAAG GGAGCCGGCT 
GTTTATGGTT CTCTTACCCT GGAAGAGATT AATGCCCAGA TTTTAAATTT TACCCAAGAA 
CGAGGAATCA GGGTAGAATT CTTTCAATCC AACCATGAGG GAGATCTGGT GGATCAACTC 
CAGGCAGCTG CAGAAAGCAT GGATGCCGTG GTGTTTAACC CCGGTGCTTT TACACATTAT 
AGCATCGCCC TGCGGGATGC AGTGGCGTCC ATTGATATTC CTGTAATCGA GGTGCATCTA 
TCGAACATCC ATGCCCGTGA AGAATTCCGT CACAAGTCGG TTATTGCACC AGTGGCTGCT 
GGTCAAATCA GTGGCTTTGG TTCTGCAAGC TATCTACTTG GCATTCAAGC GGCGCTATCC 
CTTGCTCAGT CGAGGAGGAA TTAA 

 

Protein sequence

MKILVLHGPN LNRLGKREPA VYGSLTLEEI NAQILNFTQE RGIRVEFFQS NHEGDLVDQL 
QAAAESMDAV VFNPGAFTHY SIALRDAVAS IDIPVIEVHL SNIHAREEFR HKSVIAPVAA 
GQISGFGSAS YLLGIQAALS LAQSRRN