Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1022 |
Symbol | |
ID | 4957338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1094473 |
End bp | 1096137 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640180192 |
Product | type II secretion system protein E |
Protein accession | YP_001112382 |
Protein GI | 134298886 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACCG TTGCACCGAA AAGTTTAATA GGCAATATTC TTCTTGAAAA GGGTGCCATA AGTCAACAGC AGCTAAGGGA AGCCCTAAAT AACCATCGTC AGACCGATCA ACCTTTGGGA CAAGTACTTG TTGATTTGGG TTATGTCACT AAGAAACAAG TATCCCAATA TTTGGATTAC CAGGAGCAAA TGGAAGAAGA AGTCATTCAT ATACAGGAAA TTGATAAAGC CCTTCTAAAG CTCTTCTCGG AACAGATCCT TCGCAGATAT AAGATATTTC CTCTTTTTAA AAAGGGCAAT AAACTAACTG TTGCTATGGC GGAACCAGCC AATGTGATTG CCATTGATGA TTTAAAAGTG ATTTCCAATC TGGATATTGT GCCGGTGGAG GTTCAGGAGC AGATCATTGA ATTAGCCATA GACCTCTACT ACGACATTAC AAAAAGGGAA GTAAACGATA AAGAACAAAG ATTAGTCATT ACGGATGAAG AAGAAGTCCC CATTATTCAG TTAGTTTACC AAATCATTGA CAGGGCCATT GACCAAGGGG CCAGTGACAT TCATATTGAA CCTCAGGAAA AGAGAGTGAG GATCCGATAC CGTATTGATG GGATGCTGAT ACTGGGCATG GAATTAGCAC CTACACTAGA TAAAGCCATC ATTTCCAGAA TAAAGATCAT GTCGCAACTG AATATTGCCG AAAAAAGAGT ACCCCAGGAT GGCCGCATCC AGTATGGGAA GCAAAGCCGG AATTTTGATC TGCGGGTTTC CACTATGCCC ACAGTCTATG GGGAAAAGGC AGTTATTCGG ATTCTAAATC CCGAAAGCAT AAAAAAATAC CAGCTTGCAC AATTGGGATT CTCCGCCTAT AATTTGAAGA GCTTTCAGAA ATGTCTTAGG GCCACCAGTG GGATGGTACT AATTACCGGC CCCACAGGTT GTGGTAAAAC AACAACCCTA TACGCTATTC TAAATGAACT AAACCTTGAG GACAGAAATT TTAGTACCAT TGAAGACCCG GTAGAATACC GTCTGGAAGG AATTAATCAG ACCCAGGTTA ATACCAAGAC GGGCATGACC TTTGCCGTAG GGTTACGTGC TCTTTTGCGG CAGGATCCAG ATATCATTAT GGTGGGTGAA ATTCGAGACC GGGAAACTGC TGAAATTGCT GTAACTGCAG CCGGTACAGG ACACTTGGTA TTTTCTACCT TGCATACTAA CGATGCACTG GGTGCACTGG ACAGGCTTAT TCACATGGGG CTTGAGATTT TTCAAGTGGC TTCCTCTGTA TTGGTGGTTG TAGCACAGCG CCTGGTTCGC AAGCTCTGTC CCTACTGCAA GGAGGGCTAC TTAGTTGAAA CCAAGTCTCC TGAATATGCT TTTTTACAAA GCACTCCTTG GCAGGATCAT ATTTTTTATA AAGCAAAAGG TTGTGTGCAT TGCAACTTTA TTGGCTATCG CGGGCGCATG GCCATACAAG AGGTGTTGCA AGTTAATGGT AATATCCGTA AACTGCTGGT AGAAAGGGCT CCTAGCGGTG AATTAAAGAA AGCAGCCCTC CAGGGGGGCA TGACAACCCT TAAAACTGAT GGTATAGAGA AGGCCCTTCA GGGCTTAACC AGTATCCCAG AAGTTATGCG GGTGGCCTAT TCCGATGAGG AATAG
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Protein sequence | MLTVAPKSLI GNILLEKGAI SQQQLREALN NHRQTDQPLG QVLVDLGYVT KKQVSQYLDY QEQMEEEVIH IQEIDKALLK LFSEQILRRY KIFPLFKKGN KLTVAMAEPA NVIAIDDLKV ISNLDIVPVE VQEQIIELAI DLYYDITKRE VNDKEQRLVI TDEEEVPIIQ LVYQIIDRAI DQGASDIHIE PQEKRVRIRY RIDGMLILGM ELAPTLDKAI ISRIKIMSQL NIAEKRVPQD GRIQYGKQSR NFDLRVSTMP TVYGEKAVIR ILNPESIKKY QLAQLGFSAY NLKSFQKCLR ATSGMVLITG PTGCGKTTTL YAILNELNLE DRNFSTIEDP VEYRLEGINQ TQVNTKTGMT FAVGLRALLR QDPDIIMVGE IRDRETAEIA VTAAGTGHLV FSTLHTNDAL GALDRLIHMG LEIFQVASSV LVVVAQRLVR KLCPYCKEGY LVETKSPEYA FLQSTPWQDH IFYKAKGCVH CNFIGYRGRM AIQEVLQVNG NIRKLLVERA PSGELKKAAL QGGMTTLKTD GIEKALQGLT SIPEVMRVAY SDEE
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