Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1020 |
Symbol | |
ID | 4958531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1092835 |
End bp | 1093368 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640180190 |
Product | shikimate kinase |
Protein accession | YP_001112380 |
Protein GI | 134298884 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAACA TTGTACTAGT TGGTTTTATG GGTTCCGGCA AAAGTTCCAT CGGTCATCGT CTGGCAAGAA AATTAGGGTA TCAGTTTGTG GATACAGACT ATGCCATCGA GGAAGTTACT GGACTCACAG TGGAACAAAT CTTTGCTAAA CATGGCATTA AACGCTTTCG AGGTGAAGAG GTTTTACTGG TAAGTAAGTT GGCAGATAAA GAAGGAGTTG TCATTGCCAC CGGCGGTGGC TTAGTTCTGA ATTCGCAAAA CGTAGAAAAG CTTCAGCAGA ATGGCATATT TATTTGTCTG CAGGCCTCCC CGGAAACCAT CTGCAAGAGA GTAAAAAACA AAAGAACACG TCCATTACTG GCCAGGGGTA ATCTGAAAGA AAAGGTTATA AAACTGCTGC AGGAACGAAA AGATGCCTAT GACATGGCAG ATTTGACAAT TAGTACCGAT CATTTAGAAC CAGATGATAT TGTTAAAATC ATCTATAAGT TTCTTTTGGA GAGGGGAGTC ATTCATGGGA ACCATTCAGG TTGA
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Protein sequence | MKNIVLVGFM GSGKSSIGHR LARKLGYQFV DTDYAIEEVT GLTVEQIFAK HGIKRFRGEE VLLVSKLADK EGVVIATGGG LVLNSQNVEK LQQNGIFICL QASPETICKR VKNKRTRPLL ARGNLKEKVI KLLQERKDAY DMADLTISTD HLEPDDIVKI IYKFLLERGV IHGNHSG
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