| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0974 |
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| Symbol | |
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| ID | 4956937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1029010 |
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| End bp | 1031409 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640180144 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001112334 |
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| Protein GI | 134298838 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid
[TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAACTT TAGTAATTAC TGAAAAACCG TCTGTAGGGA AAGACATAGC CTCTGTTTTA
GGCAGATTTG AAAGCAAGGA CGGGTACCTG GAAAACGAAA AATATATCGT TTCTTGGGCC
TTTGGACACC TAGTGGAATT AGCAGACCCA TCTGTATATG ATCCTGTATT TAAAAAATGG
GATTTAGCAA CACTGCCAAT AATCCCTGAT AGTTTCAAGC TGGTTGAAAT TGCTGGTTCA
TCTGCTAAAC AGCTTAGGAC ACTGAAAAAG CTACTAAACT CAGCAGAAGT ATCCCAGGTG
GTTAACGGCT GCGATGCTGG CCGCGAAGGT GAGAGCATCT TCCGTAGGAT TTACCATTTT
TGCGGTTGTC GAAAACCAAT CAAGCGACTT TGGTTATCGG AAACAACCCC AGCAGCAGTA
AAGGCCGCAT TCAAAGCACT ACGGGAGGGC CAAGAATATA ATAATCTAGC AGCAGCTGCT
GAGGCCCGTG GACAAGCAGA CTGGTTAGTT GGGCTTAATG GTACTCGGGC CTTCACGGTA
CGGCATGGTA CAGTACTCTC AGTGGGGCGA GTTCAAACAC CGACACTAAA CCTGATCGTA
TCACGGGAAA GGGAGATTAA TAATTTTGTA CCGGTGCCGT ATTGGGAAGT TTGGGGCACC
TTCCAAACGG ATAACGGCAT GTACAAAGGG AAATGGTTCC GGGAAAAAGA GGACCGGTTG
CCTAACAGGG AAGCAGCCCT CAACTTAACA ACTAAATTAT CTTCTGAGGC AAAGGGGCAG
GTAATTTCTT TGGAGCAGAA AGAAGCCAAA GAACTACCGT CCTTTTTGTT TAACTTGAAT
GATCTGCAGA AGGAGGGCAA CCGGCGGTAT GGTTTTACAG CACAACAGGT CTTGGATATT
GCCCAATCAC TTTATGAAAA ACACAAGCTG CTGACTTATC CCAGGACTGA CAGCAGGCAT
TTGTCCAACG CCATGATATC AACATTACCT GAACGCTTGG CTACTCTAAA GAATGCACCT
AAGTATGCAG AGTTAATCCC AGACACACTA CCTGGATTAA GTAAACGCTA CGTGGATGAT
GGCAAAATTA CAGACCACCA TGCCATTATT CCCACAGCAG TTGATCCGTC AAAGGCTCAG
TTAAGTGATC AGGAAAAGAA AATATATGAC TTAGTGGTCC GGCGTTTTCT TAGTATTTTC
TACCCAGAGG CCCGGTATGC TGTGACCGAA GTATTCACAG AAACTGCAGG TGAGCTATTC
AAGTCGAGGG GACGGGTAGA ACTGGCAGCC GGTTGGAAAA TGGTGTGGCG TGGATCTGAC
CAAGAAACAG CAGAAGAGGG AAACGGGGAT GATCCTGAAG ATCAAGCCTT ACCGCCTTTA
ACCCAGGGGA AATCAGTGGA TGTCAGTAAA GTTGAAATCT TAGAAAAACA GACTAAACCA
CCTAAACGGT TTACGGAAGC GACCATACTG GCGGCCATGG AGAGTGCCGG TAAGTTTGTT
GAGGACAAAG AAATGGCTGA GGTGTTAAAA CAAACTGGTG GCATTGGAAC CCCGGCCACC
AGGGCTGCCA TCATCGAACG TTTGATTAAA GTTGGATACG TGGCCAGGGA TAAAAAATCC
TTGGTACCCA CAGCCAAGGG TCAGATACTA ATTGATCTGG TGCCAAAGCA ACTAAAATCG
GTGGAATTAA CTGCTTCCTG GGAGGATGGG CTGCGGAGGG TAGAAGAAGG TCAACAAAAC
GCTGCGCTAT GGATACAGGA CATTCAGGCT TATACCCGGG AATTGGTGGT ACTGGCTAGA
AATCAAGAAG TATCCCAAGG GGTTGGTACA GCAAGGGACA CCCTTGGCAA ATGCCCGGTC
TGTGGCCGCG ATGTGGTAGA AACCGCCAAA AGCTATGGCT GTAGTGGTTA TAAAGAGGGG
TGTAAATTTG CCATTTGGAA GGAGATCAAC AGTAAAAAAA TATCCGCCAA ACAAGCCGAA
ACATTACTTA CCAAGGGGAA AACAGGTTTA ATTAAAGGGT TTAAGAGTAA GGCAGGAAAA
ACCTTTGATG CTCTTTTGGT GTTAGGCGAA GACGGCAAGA TTACCTTTGG TTTTGCTAAT
GCAGTCAATG ATCAACCTGG TAGTACAGGT AACACGGCTT TAGGAAAGTG TCCATTATGT
GGCAAGGATG TTGTTGAAAA CTCACGCAGC TATGGTTGCA GTGGCTATAA AGATGGTTGT
AAATTTGTGA TCTGGAGAGA AATTGCCAAG AAAAAAATTA CTCAAACACA AGCCATAGAA
CTGCTTGCCA AAGGAAAAAC CGGCATCATC AAAGGGTTTA AAGGACAAAA GGGCAGTTTT
GATGCTGCCT TAACTATCAT TAACGGTGAA ATAAAATTTG CTTTTGCAGA AAGGATGTAG
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| Protein sequence | MKTLVITEKP SVGKDIASVL GRFESKDGYL ENEKYIVSWA FGHLVELADP SVYDPVFKKW
DLATLPIIPD SFKLVEIAGS SAKQLRTLKK LLNSAEVSQV VNGCDAGREG ESIFRRIYHF
CGCRKPIKRL WLSETTPAAV KAAFKALREG QEYNNLAAAA EARGQADWLV GLNGTRAFTV
RHGTVLSVGR VQTPTLNLIV SREREINNFV PVPYWEVWGT FQTDNGMYKG KWFREKEDRL
PNREAALNLT TKLSSEAKGQ VISLEQKEAK ELPSFLFNLN DLQKEGNRRY GFTAQQVLDI
AQSLYEKHKL LTYPRTDSRH LSNAMISTLP ERLATLKNAP KYAELIPDTL PGLSKRYVDD
GKITDHHAII PTAVDPSKAQ LSDQEKKIYD LVVRRFLSIF YPEARYAVTE VFTETAGELF
KSRGRVELAA GWKMVWRGSD QETAEEGNGD DPEDQALPPL TQGKSVDVSK VEILEKQTKP
PKRFTEATIL AAMESAGKFV EDKEMAEVLK QTGGIGTPAT RAAIIERLIK VGYVARDKKS
LVPTAKGQIL IDLVPKQLKS VELTASWEDG LRRVEEGQQN AALWIQDIQA YTRELVVLAR
NQEVSQGVGT ARDTLGKCPV CGRDVVETAK SYGCSGYKEG CKFAIWKEIN SKKISAKQAE
TLLTKGKTGL IKGFKSKAGK TFDALLVLGE DGKITFGFAN AVNDQPGSTG NTALGKCPLC
GKDVVENSRS YGCSGYKDGC KFVIWREIAK KKITQTQAIE LLAKGKTGII KGFKGQKGSF
DAALTIINGE IKFAFAERM
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