Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0924 |
Symbol | |
ID | 4955609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 983243 |
End bp | 984127 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640180095 |
Product | phage integrase family protein |
Protein accession | YP_001112285 |
Protein GI | 134298789 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.852644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAATT CTTTCATTCT AGAATATCAG AAGCAAGACC GGTCGCCTTT AACTGTGGCC GGGTATCAAA CGGAGTTAGA AAAGTTTCAG CAGTGGTTAT GGACCACTGT TAACGAACCT TTGGAACGGG CTACTGATAT GGATGTTAAG GATTATAAAC AATATCTCCT TACGGTGAAA AAGCAAAAAC CATCTACAGT TAACCGGGGA CTCAAGGTGT TGCGGAAATA TTATTCCTGG GCAGTAATCC AGGGGCTGAT ACAGTATAAT CCGGCAGCTA ATGTAAAGTT AGTACGGGTC CAGCAAGCAG CTCCCAAATG GTTGGATCGG ATCGATGCAG CTAGGCTCAA AAGGGCTGTG CTAAATGATG AGCATAATGC ATTTAAACGT GCCAGAGATT ATGCCATTCT TTTACTAATG TTGGGGGCCG GGCTCAGAGT TGCTGAAGTT GCCGCATTAG AACTAGCCGA CATTATTATG TCGGAGAGAA AGGGTACAGT AATCGTAAGA AAGGGGAAGG GAAACAAGTA TGCTGAGGTT CCCCTGAATA AAGATGTACG TCAAGCCTTG AATGAATATC TAGACATAAG GAAGACCGTT AAGTGCTCAG ATAGTACGTT CTTATTTCTT GGAGAAAGGG GACCAATTAA GAAGAGAGCA ATTCAGTTTC GAGTGGAAAA GTATGCTGGG AAGTCAAGTG TAAAAGCCAG TGCCCATCAA TTGCGCCACA CCTTTTGTAA AGAACTAATT AACCATGGGG AACCTTTGAA TGTAGTAGCT CATTTATCAA GGCATTCTGA TGTTAATACC ACAATGAGGT ATATAACCCC TTCGGAAAGT GAATTAAGTC ATGCGGTGGA AAAAATTAGT GTTTTGGAGG ATTAG
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Protein sequence | MINSFILEYQ KQDRSPLTVA GYQTELEKFQ QWLWTTVNEP LERATDMDVK DYKQYLLTVK KQKPSTVNRG LKVLRKYYSW AVIQGLIQYN PAANVKLVRV QQAAPKWLDR IDAARLKRAV LNDEHNAFKR ARDYAILLLM LGAGLRVAEV AALELADIIM SERKGTVIVR KGKGNKYAEV PLNKDVRQAL NEYLDIRKTV KCSDSTFLFL GERGPIKKRA IQFRVEKYAG KSSVKASAHQ LRHTFCKELI NHGEPLNVVA HLSRHSDVNT TMRYITPSES ELSHAVEKIS VLED
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