Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0901 |
Symbol | |
ID | 4957750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 960999 |
End bp | 962222 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640180072 |
Product | peptidase U32 |
Protein accession | YP_001112262 |
Protein GI | 134298766 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.451276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAT TAGAACTCCT CGCTCCGGCA GGGGATTTAG AAAAGTTAAA GATTGCCGTC CTTTACGGGG CAGATGCTGT CTACCTGGGG GGACGGCAAT TTAGTCTTAG AGCAGGTGCC GCAAATTTTG ATTATGATGA TATGCTGCAG GGAATAGAGT TTGCCCACAG TCAGCATGTT AAAGTCTATG TGGCCATTAA TATTTTTGCC CACAATGTAG ATCTCACAGG TCTACCGGAG TATTTAGAAT TTCTAGTCGG GGCTGGGGTT GATGGAGTTA TCGCCAGTGA TCCCGGCGTT ATCGACACAA TCATGAAGTT ACAGCCAGAA TTACCGATCC ATCTTAGTAC TCAGGCCAAC ACAACAAACT GGGCCAGTAC AGCGTTTTGG AAGCGAATGG GTGTACAAAG GGTGGTTCTT GCCAGGGAGC TGTCCCTGGA AGAGATTAAA GAAATTAGCA GTCGGGTTGA GATTGAGCTG GAAGCCTTTA TTCATGGGGC CATGTGTATG TCCTATTCTG GTCGCTGTTT ACTTAGTAAT TATATGACCG GCAGAGATGC AAATCAGGGT GATTGTGCTC AATCTTGTCG CTGGAAATAT CATTTGCTGG AAGAAAAGCG CCCAGGACAA TACTTTCCAG TGGAAGAAGA TGCCAGGGGA ACCTATTTTA TGAGTAGCAA GGATTTATGC CTGATTGAAT ACATTCCCCA GATGGTGGAG GCAGGGGTAT CCAGCTTTAA AATAGAAGGT CGCATGAAGA GTATTCATTA CCTGGCCACT GTAGTTAAGG CCTATCGGCA GGCCCTTGAT GCCTATATTA ACAATCCTGC CGGTTATCAT ATAAACCAGC AGTGGTTGGA TGAAATCCGC AAGGTGAGTC ATCGTGAGTA TACCACTGGT TTTATATTGG GTGACAAAGG GAGGACTGCA ACAGTTAATC CGGGCCAGAA CAGTTATACC CGTCTTGCTT CCTTTGTTGG CCTTGTACAG TCCTATAACA AAGATACGGG AAGAATCCTT GTTCAACAAA GAAATAATTT TAAAGTGGGG GACAGACTGG AAATCCTATC ACCCACTGGG GAAAACCAAA TGATTGATGT CACAGACATG TATGATGGGA AAACAGGTGA GACACTAACG GTTGCTCCTC ACCCTCAGCA AGTTGTTGAG TTGTCTGTTG AGCGAGTTGT GAAACCAATG TCTATGTTAA GGAGACTGGA ATAA
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Protein sequence | MKKLELLAPA GDLEKLKIAV LYGADAVYLG GRQFSLRAGA ANFDYDDMLQ GIEFAHSQHV KVYVAINIFA HNVDLTGLPE YLEFLVGAGV DGVIASDPGV IDTIMKLQPE LPIHLSTQAN TTNWASTAFW KRMGVQRVVL ARELSLEEIK EISSRVEIEL EAFIHGAMCM SYSGRCLLSN YMTGRDANQG DCAQSCRWKY HLLEEKRPGQ YFPVEEDARG TYFMSSKDLC LIEYIPQMVE AGVSSFKIEG RMKSIHYLAT VVKAYRQALD AYINNPAGYH INQQWLDEIR KVSHREYTTG FILGDKGRTA TVNPGQNSYT RLASFVGLVQ SYNKDTGRIL VQQRNNFKVG DRLEILSPTG ENQMIDVTDM YDGKTGETLT VAPHPQQVVE LSVERVVKPM SMLRRLE
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