Gene Dred_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0731 
Symbol 
ID4955916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp784116 
End bp786773 
Gene Length2658 bp 
Protein Length885 aa 
Translation table11 
GC content45% 
IMG OID640179905 
Productsingle-stranded-DNA-specific exonuclease RecJ 
Protein accessionYP_001112095 
Protein GI134298599 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID[TIGR00644] single-stranded-DNA-specific exonuclease RecJ
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000934537 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAGAC AAAAAAAGTG GCGCGTGAAA GCACCAAATC CCGCGTTGCA ACAGATTCTT 
TCTTTCGAAT TAGGTATTTC TAAAATCTTT GCCCAGTTAT TAATTAACCG AGGAATCTAT
ACCGTTGATC AGGCCAGAGC GTTTCTAGGT AGTGAATTAG ACAAAATGTT CAGTCCCTGG
CTAATGCAGG ATATGAAGAA AGCTGTTGAA CGTATTCTCG GGGCCAGAGA TAAGGGTGAA
CAGATTTTAG TATACGGGGA CTATGATGTA GATGGTATTA CTGGTACCAC GGTTTTGGTA
TTGGCCCTTC GAAGGCTTGG TTGCAAGGCG GATTATTTTA TCCCACATCG ATTGGAAGAA
GGTTACGGTC TTAATAAGGT TGCCCTGGAA CGGGCAGTGG AACGGGGCGT TTCCTTAGTG
GTGACAGTGG ACTGTGGCAT CAGTGGGGCC GAAGAGGTAG AAGTGGCAAA GGCATTAGGT
TTGGAGGTGG TCATTACAGA TCACCACGAA CCACCGGTTC AATTACCCGC TGCAGTGGCG
ATTTTGGATC CCAAGAGATC CGGCTGTAGT TACCCTTTTA AGGAGTTAGC TGGCGTGGGT
GTGGCGCTTA AATTAATTCA AGGACTTTTT GAACAGGCAG GGTTGAGCCA ACGCAATTGG
GAAGAATATT TGGACCTTGT ATGCCTGGGA ACAGTGGCGG ATATTGTTCC CCTGCAGGGT
GAAAATCGTA TTCTAGTCAA GCATGGGCTA CCCCAAATTA GCAATAGTAA GCGGCCTGGT
TTGCAGGCGT TAATTAAGGT CAGTGGCATA AAAGCCGAGG TGTTAGGCAC TAGGGAATTG
GGCTTTGGTC TGGCTCCCCG TTTGAATGCC GCTGGACGAA TGGGCGATGC GGGTCTTGGT
GTAGAACTTT TGCTGGCAGA AGATTTATTA GTGGCAGAGG AAATGGCAGA GGAATTAGAC
AGAGGAAATC ATGAAAGACA ACAGGTGGAG TCAAAGGTTC TGTCAGAGGC TCTGGCTTTG
CTGGAGACAG ATTCGGAAAT TTCCCAGGGT AAAGTGTTGG TGCTGGCTTC CGAGAATTGG
CATCCTGGTG TCATTGGCAT TGTTGCCTCC AGATTGGTGG ATCGATTTTA CCGGCCAGTT
TTTATGATCA GTCTAGAAGA AGGGAAAGGA AAGGGATCGG CCAGAAGTAT ACCCGGCTTT
AATTTGTATC AGGCTATGGT TAGTTGTCAG GATCATTTGG AACAGTTTGG TGGACACGCT
ATGGCTGCGG GTTTTAGTAT ACATGTAGAT AAAATTAATG AATTTCGCAA GACAATCAAC
GCAATGGCAG AAGAATTTCT TTCAGAAGAA CACCTGACAC CAAACCTTGA CTTAGATGCC
TTAATTAACC TGAACGATCT TTCCATGGAT ACTGTTCAGG AGTTGAATCA GTTATCACCT
CTGGGACATT GTAACCCAGG ACCTATCTTA GGATGTTGCC AGGCAACGGT TATTAACTGT
CGGGAGGTTG GTAAGAACGG TGGCCACCTA AAAATGAGGG TTCGGGAGGA TCACACAGTT
TTAGACGGAA TTGGCTTCAA CTTAGCCTCC TACAGTGAAA TGCTGGCCGC TAACGATACA
GTGGATATGG CCTTTATTCC TTCTATTAAT GTATGGAATG GTCGTACCTC TGTTCAATTG
GAAGTCAAGG AACTGAAAGA AACCGGCGAG GTAGCGTCTC AATTGGTTGA AGCAGGGGAA
TATGACAGGG AAGTAAAAAG GACCTTGACC AAATTCTTGC ACTTACCGAA GGAAAAGATT
GCAGAAAGCC TGGTTCCCTT AGGAATTTTA CACCTATTGA AGCTTTACAA TACAGATTAT
ATTGAGGATA GTAGTCCATG TAAACTTCAA ATAGAAGATT ATAGGAACAA TCCGGATCGA
CTGGCTCAAC TGGTACAATT GGTGGAAGCC AAGGACTCCT CTATAATTAT CGTAGAAAGT
ACAGCCCAAG CAATTCAAAT AACAACCTTT TTAAGCGAAC AGGGTGACTC CTTTGGAACC
CTGGCAGTTT ATCACCCGGC ATTAGAGGAT TGTGAAGTAA AGCAATTGAG GTCCTTTGTA
CAATCCGGCA GGGCCAAAGT GCTGGTAACT ACACCTTTTC ATCCCCTAAA GGATTTTAAT
TTTGAGCAGG TGATTTTCTA TTACCTGCCA TATCAACTGG CAGAATGTAT CCTTGATGAT
GGGTGTGCCA GTAGGGTTGT TTTACTGGGG GGAGAAAAGC AAGCTGCAGA AAGCCGGGAA
CATATTGATG CAATGGCGCC GGAGCGGCAG GCCCTGGGGG AAGTATTTAA GTTATTAAGA
CAAAGAATAA ATCAACAGGC CAACGGGGAA ATCACACTGG AGGAACTATG TGCCTGCTTA
AAGAAATATT ATCCGAAGGC ATCTCAACAT ACCGCCGAAG TGAGTCTAAA TGTTTTCCAA
GAGTTAGGGC TGTTAGAGTA TAAAAATCAA GGTGATATTT ATTTCTATAG AATTAATCTT
CAGGTCAGGG GCGATTTACA GAATTCGCAA ACTTACAAAT GGTCACTACA TACAAAGGAA
GAATGTCTAC GTTTTCAGCG GCAGTATCTA TCTGCAACGG TGGAGGAGTT AGGGCGGCTG
TTCACATGCA AGTTATAA
 
Protein sequence
MRRQKKWRVK APNPALQQIL SFELGISKIF AQLLINRGIY TVDQARAFLG SELDKMFSPW 
LMQDMKKAVE RILGARDKGE QILVYGDYDV DGITGTTVLV LALRRLGCKA DYFIPHRLEE
GYGLNKVALE RAVERGVSLV VTVDCGISGA EEVEVAKALG LEVVITDHHE PPVQLPAAVA
ILDPKRSGCS YPFKELAGVG VALKLIQGLF EQAGLSQRNW EEYLDLVCLG TVADIVPLQG
ENRILVKHGL PQISNSKRPG LQALIKVSGI KAEVLGTREL GFGLAPRLNA AGRMGDAGLG
VELLLAEDLL VAEEMAEELD RGNHERQQVE SKVLSEALAL LETDSEISQG KVLVLASENW
HPGVIGIVAS RLVDRFYRPV FMISLEEGKG KGSARSIPGF NLYQAMVSCQ DHLEQFGGHA
MAAGFSIHVD KINEFRKTIN AMAEEFLSEE HLTPNLDLDA LINLNDLSMD TVQELNQLSP
LGHCNPGPIL GCCQATVINC REVGKNGGHL KMRVREDHTV LDGIGFNLAS YSEMLAANDT
VDMAFIPSIN VWNGRTSVQL EVKELKETGE VASQLVEAGE YDREVKRTLT KFLHLPKEKI
AESLVPLGIL HLLKLYNTDY IEDSSPCKLQ IEDYRNNPDR LAQLVQLVEA KDSSIIIVES
TAQAIQITTF LSEQGDSFGT LAVYHPALED CEVKQLRSFV QSGRAKVLVT TPFHPLKDFN
FEQVIFYYLP YQLAECILDD GCASRVVLLG GEKQAAESRE HIDAMAPERQ ALGEVFKLLR
QRINQQANGE ITLEELCACL KKYYPKASQH TAEVSLNVFQ ELGLLEYKNQ GDIYFYRINL
QVRGDLQNSQ TYKWSLHTKE ECLRFQRQYL SATVEELGRL FTCKL