Gene Dred_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0703 
Symbol 
ID4956988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp756694 
End bp757545 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content49% 
IMG OID640179877 
Productcytochrome c assembly protein 
Protein accessionYP_001112067 
Protein GI134298571 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR03144] cytochrome c-type biogenesis protein CcsB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCGA TCATTGAACA ACTTATCTTT AATAGTACCC TGTGTCTTTA TGCTCTTGGA 
GCATTAATAT TGTTAGCCTA TACCGTTACA GAAAAAACCA GACTGGTAAA CTGGGCAGTC
TTTGCAGTGT GGACTGGCTT CCTGGCACAT ACAGCGGGTC TTGTTATGCG TTCCATACAC
GTTGGCCGAC TACCCTTTAC CAATATGTAT GAATTTATTC TCTTCTTTGC CTGGGGGGTC
ACACTGGCTT ATTTGTTTAC ACACCGCAAG CAGCCGCTGC CCCTGCTGGG TACTGTGGTT
GTACCTATGA CTGTAATGCT GATGGCGGCC GCCAGTATGA TGAACGGGGC AGTTAGACCA
TTAATGCCTG CTCTGCAAAG TTATTGGCTG CACTCCCATG TGGCGACGGC GGTATTGGCC
TATGGTGCCT TTGGGGTATC CTTTGGGGTT GGGGTACTAT ATTTAATTCG AGATGCCCAG
CCGATGTCCC TTAGTTCTAC GGAAATAGGC AATACCGCTG TAATCCGTGG TGTACCCATG
CTGCCCAGTA TAGAAACCCT GGATAAACTG CTTTATCGGG TCATTGCCTT TGGCTTTGTA
TTCTTAACCC TGGTACTGAT AACCGGAGCA GTATGGGCCG AACAGGCCTG GGGTACTTGG
TGGAGTTGGG ATCCCAAAGA AACCTGGGCC CTTATCACCT GGTTGATCTA TGCCATTTTC
CTGCATGGAC GTTTTACCCG GGGCTGGCAG GGAAGACGTT CTGCCTGGCT GGCCATCCTG
GGTTTTGCTG CAGTAATCTT TACCCTTTTT GGAGTAACTT GGCTGATGCC GGGTATGCAT
AGTTACAGCT AA
 
Protein sequence
MNSIIEQLIF NSTLCLYALG ALILLAYTVT EKTRLVNWAV FAVWTGFLAH TAGLVMRSIH 
VGRLPFTNMY EFILFFAWGV TLAYLFTHRK QPLPLLGTVV VPMTVMLMAA ASMMNGAVRP
LMPALQSYWL HSHVATAVLA YGAFGVSFGV GVLYLIRDAQ PMSLSSTEIG NTAVIRGVPM
LPSIETLDKL LYRVIAFGFV FLTLVLITGA VWAEQAWGTW WSWDPKETWA LITWLIYAIF
LHGRFTRGWQ GRRSAWLAIL GFAAVIFTLF GVTWLMPGMH SYS