Gene Dred_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0680 
Symbol 
ID4956709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp735074 
End bp735775 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content43% 
IMG OID640179854 
Producthypothetical protein 
Protein accessionYP_001112044 
Protein GI134298548 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.196339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AACAGTACCA ATGGGGGCTT GTATTGGTGG GCATAGTAAT GGGGTTAATG 
CTTACCGTGC AATATCGCTC CTACAAGGAA ATTAATGAAA CTCCTCCCAT TGCCAGGGTC 
CAAGCCCTTG CCAATGAGAT TAAGCAGAAA AAAGAAGAAC GTAGCGAACT GCAAAAGAAA 
GTAAATGAGC TTAGAGAGAA ACTAGATAAA AAGGCCACCG TACAGTCCGA TAACACACGG 
ACTGACTTGG AGACCTTTAG AATTTTGGCG GGTATAAAAG CGGTTAAAGG CCCAGGGGTG 
GAAGTCACAT TAAATGATAG TGAGGTGTCC CTGGCTCCTG GTCAGGACCC GAATCTTTAT 
GTGTTGCATG ATGAAGATGT ATTAAAGGTT CTTAATGAAC TAAAGGCTGC AGGGGCGGAG 
GCCATTGCCT TAAATGGTGT AAGATTAATA TCCACCAGTG AGATACGGTG TATTGGCCCA 
ACAATTCTTA CCAATAAAAA CAAAAGGTTG CCTGCTCCTT TTTCCATCAC GGCCATAGGT 
AATCCAAAAA CCTTAGAAAA CTCGCTCTTC ATGAAGGGCG GAGTGGTGGA TCAACTTAAA 
ATTTGGGGGA TACAGGTTGA TGTTCGCAAA AAGGATAACC TGCAAATCTC TGAATATACA 
GGACCCACCA CCTTTGAGTT TGCTAAGTCC GTACAGGAGT AG
 
Protein sequence
MKIKQYQWGL VLVGIVMGLM LTVQYRSYKE INETPPIARV QALANEIKQK KEERSELQKK 
VNELREKLDK KATVQSDNTR TDLETFRILA GIKAVKGPGV EVTLNDSEVS LAPGQDPNLY 
VLHDEDVLKV LNELKAAGAE AIALNGVRLI STSEIRCIGP TILTNKNKRL PAPFSITAIG 
NPKTLENSLF MKGGVVDQLK IWGIQVDVRK KDNLQISEYT GPTTFEFAKS VQE