| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0671 |
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| Symbol | |
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| ID | 4956573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 724091 |
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| End bp | 725464 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640179845 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001112035 |
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| Protein GI | 134298539 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACAT ATACAATAGA AGAAATAGCC CAGGTTATTG GTGGAACTCT GCTTCAGGGT
GATCCGGTAA CTAAAATTAA GGGAATACAT ACCGACAGCC GAAGGGCAAA ACCCAGAGAA
CTATTTGTGG CACTGCAAGG TCAACAGGCA GATGGCCATG ATTTTGCGCG AAAGGCCATC
GAACAGGGGG CTAGTGCCTT GCTGGTTTCT CGCGAAATAA CCGGGATAGC TCCACAAATC
CCAGTTGTGT TAGTAAAAAA TACTCTCCAG GCCCTACAAC AGTTGGCCAG CCATAACCGT
TCCAGACTTA ATATACCAGT GGTGGCCGTG ACTGGAAGTA ACGGCAAAAC ATCCACCAAA
GATATGATTG CAGCGGTATT GAATACCCGT TTTAAAACCC TTAAAACTGA AGGTAATTTC
AATAATGAAC TGGGCCTTCC CCTAACGTTG TTGGGACTTG GAGAAGAACA CCAGGTTGCG
GTGGTAGAAA TGGGTATGAG AGGGCCGGGG GAAATTGATT TTCTTGCAGG GCTGGCAAAG
CCTACCGGTG CGGTTATTAC GAATATTGGA GAGGCCCATC TGGAACGATT GGGGTCGGTG
GAGAATATTG CCCTGGCAAA GACTGAGGTG CTGGCTCATA TTGGAAGAGA CGGCTTTGCA
ATTTTGAATG CCGACAGTCC ATACCTAGGG GAATTAGCCC GGAATTGTCA GGGGAAAGTT
TGGCTTTACT CCCTAGAAGG TATCGGAGAC CTGCAAGCTT CCAATATCCG ACCCGAGGGC
ACTGGTGTTC GTTTTAATAT CTCTTCTCCT GGTGGAAAAG AAGAAATTTA CTTACCAGTA
CCCGGCAGTC ACAATGTTAT GAACAGCCTG GCGGCCATCG GTGTGGGTTT GCAATTGGGA
CTGCAGTTAG AGGAGATTGC CCAGGGATTA GCTCAGCTAT GTCTTACCCA TTCAAGATTG
CAAATATTGT CAAGCAACGG TCGAGTCATT ATTAATGATA CCTATAATGC GAACCCTTCA
TCAACCAAGG CAGCTCTAAA AGTACTAAAG GAGACTGCGA GGAGCCGTAA AATAGCTGTT
TTGGGAAATA TGTATGAGTT AGGGGACCTA GAACAATCTG GTCACCAGGA AGTGGGCGAG
GCAGCTGCCG CAATCCCGGT GGATTATTTA ATTTCAGTGG GAAATCTGGC ACAATGGATC
ACCCAGGGTG GTCTTAAGGG TGGTTTATCA CAGGAAAGAG TGTTTCAATG CCAGGAAAAT
TCTGAAGCAG TTGAAGTACT GGGGAAAATT TTAAAACCAG GCGATACCAT TCTGGTCAAG
GGGTCCCGAG GCATGCATAT GGAATATATT GTAAGAGAAA TAATGAAAGA CTAA
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| Protein sequence | MLTYTIEEIA QVIGGTLLQG DPVTKIKGIH TDSRRAKPRE LFVALQGQQA DGHDFARKAI
EQGASALLVS REITGIAPQI PVVLVKNTLQ ALQQLASHNR SRLNIPVVAV TGSNGKTSTK
DMIAAVLNTR FKTLKTEGNF NNELGLPLTL LGLGEEHQVA VVEMGMRGPG EIDFLAGLAK
PTGAVITNIG EAHLERLGSV ENIALAKTEV LAHIGRDGFA ILNADSPYLG ELARNCQGKV
WLYSLEGIGD LQASNIRPEG TGVRFNISSP GGKEEIYLPV PGSHNVMNSL AAIGVGLQLG
LQLEEIAQGL AQLCLTHSRL QILSSNGRVI INDTYNANPS STKAALKVLK ETARSRKIAV
LGNMYELGDL EQSGHQEVGE AAAAIPVDYL ISVGNLAQWI TQGGLKGGLS QERVFQCQEN
SEAVEVLGKI LKPGDTILVK GSRGMHMEYI VREIMKD
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