| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0670 |
|---|
| Symbol | |
|---|
| ID | 4956572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 722385 |
|---|
| End bp | 723845 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640179844 |
|---|
| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| Protein accession | YP_001112034 |
|---|
| Protein GI | 134298538 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTATTAA AAGAGTTGTT GCAAGCAATT CCTGTAATTA CTATTATTGG AAATCCCGAA
ATTGATATAG AAGGTATCTG TTATGATTCT CGCCAGGCTG CGAAGGGCAT GATTTTTGTG
GCGGTCAAGG GGTATCAAAC AGACGGTCAT AAATATATAG AAAATGCTGT TGCAGCTGGC
GTTACTGCGG TTGTCTATGA AACTGAAATT GTATTGCCAA CTGGAGTGAC TGGCGTACAG
GTGTCCGATA GCCGTAAGGC TCTCGCCTTG ATGGCTGACC AATTTTACGG GCACCCCTCA
AAAAAACTGT CAATGGTAGG TGTTACTGGT ACCAACGGTA AAACCACTAC AACTCATTTA
ATTGCTGCTA TTTGGAGAAA AGCAAGGGTA AAGCCAGGAG TTATTGGCAC CATTCATAAT
TTAATCGGAG AAAAAGCTTT AGCCGTTAGC AACACCACTC CCGAATCCTT GGATCTGCAA
AAAATTCTTG CACAAATGTT GGATGAAGGG GTAAAGGGTG TGGCAATGGA GGTTTCTTCC
CATGCGCTGG CTTTAAATAG GGTTGCAGGC GTGAATTATG ATGTGGCAGT GTTTACAAAT
ATTACCCAAG ATCACCTAGA TTTTCACAAC ACAATGGAAG AATACTTGGC TGCTAAAGCA
AAGCTTTTTA CCACGGATAT ACAATATGCC ATTATCAATG CAGACGACCC GGCTGCCGAA
GAGTTAAAGA AAATAAGCCG CGGGAAAGTC TATACTTACG GTATTGACCA AGCTGCAGAT
ATCCGGGCTA AAGATATCCA GGTAACTGCC AGGGGAGTTA GTTTTATGGC CAGTGGTCCC
TGGGGAAACC ATCAACTTAA TTTAAAATTA ACTGGTCGTT TTAATGTCTA TAATGCTCTG
GCTGCCTATA CCACGGGAAT GGCTTTGGGT TTTGGCAGTG ATACTGTTGT ATCTGCTTTA
GAAGATGTTC CAGGGGTGGC TGGTCGCTTT GAACTGCTGG ATAAGGGACA AAATTTTGCT
GTGGTGGTGG ACTATGCCCA TACGCCGGAT GGATTAGAAA ATATATTAAC AACTGCCAGA
CAGATCACCA AAGGTAGGCT GATCACTGTT TTTGGCTGTG GCGGAGACCG GGATCGAACA
AAACGTCCCA TTATGGGCGA AATTGCTGCT CGTTACAGTG ATGTTCCAGT AGTAACCTCT
GACAACCCTC GTACCGAGGA ACCCCAGAAA ATTATCCAAG ATGTTGTAGA AGGGGTGAAC
CGGGTAATTG CTCCGGAAGA TTATCTGGTA TTAGTGGACC GTCGTGAAGC AATTAATAAG
GCCATTGAAT TGGCCCAGGA GGGTGATGTG GTGGTAATAG CCGGTAAAGG GCATGAGGAC
TATCAGATTA TTGGTACCAC AAAATACTCC TTTGACGACC GCAAGGAGGC CGCCAAGGCT
TTGGCAAGAA AAGGATACTA G
|
|---|
| Protein sequence | MLLKELLQAI PVITIIGNPE IDIEGICYDS RQAAKGMIFV AVKGYQTDGH KYIENAVAAG
VTAVVYETEI VLPTGVTGVQ VSDSRKALAL MADQFYGHPS KKLSMVGVTG TNGKTTTTHL
IAAIWRKARV KPGVIGTIHN LIGEKALAVS NTTPESLDLQ KILAQMLDEG VKGVAMEVSS
HALALNRVAG VNYDVAVFTN ITQDHLDFHN TMEEYLAAKA KLFTTDIQYA IINADDPAAE
ELKKISRGKV YTYGIDQAAD IRAKDIQVTA RGVSFMASGP WGNHQLNLKL TGRFNVYNAL
AAYTTGMALG FGSDTVVSAL EDVPGVAGRF ELLDKGQNFA VVVDYAHTPD GLENILTTAR
QITKGRLITV FGCGGDRDRT KRPIMGEIAA RYSDVPVVTS DNPRTEEPQK IIQDVVEGVN
RVIAPEDYLV LVDRREAINK AIELAQEGDV VVIAGKGHED YQIIGTTKYS FDDRKEAAKA
LARKGY
|
|---|
| |