| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0669 |
|---|
| Symbol | |
|---|
| ID | 4956539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 720119 |
|---|
| End bp | 722260 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640179843 |
|---|
| Product | stage V sporulation protein D |
|---|
| Protein accession | YP_001112033 |
|---|
| Protein GI | 134298537 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | [TIGR02214] stage V sporulation protein D
[TIGR03423] penicillin-binding protein 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACAA CAAACATACT TATCCGAAGA AGAATTACCT GTCTTTTTCT AATGGCTGCA
TTTTTTTTAT CTTTAATTGT TTTTCGCCTA GTCTGGATAC AGTTTGTCCG GGGAGATGAA
TTGCGTCAAG AAGGTATCAT TAACCGGATG AGAGATGTAC CGGTGGAGGC TAAACGAGGC
AGTATATTGG ACCAGAATGG AAACGAGCTG GTTACCAGTA TTAGTGCCGA TTCTATCTAT
GTAATTCCCA ATCATATTAA GAAACCAGAC GAAGTGGCTT CTCAAATAGC TCCTCTACTG
GGGATGGATA TTGAAAAGGT AAGGAAAATA ATTTCCCAAA AATCTCGCTT TGAGTGGATT
AAGCGGAAAG TAGACTTTGA AACTTCTCAG AAATTAAAGG ATCTTAAAAT AGAAGGAATC
GGTTTTGCTG AAGAGAGTCG GCGCTATTAT AAGCAGGAAA CCCTAGCACC CCATATTTTA
GGTTTCACTG GAACAGATAA TCAGGGGTTA ATGGGTATGG AAGCAGCCTA TGAAGAGGAA
TTAAAGGGAA TACCCGGTAG AATTGTTATA GAACATGATG CTGCAGGACG GGAAATTCCC
CAGGCACTGC ACCAATATAT TCCGCCAACC CAAGGAAATA ATCTGGTATT AACACTGGAT
CAGACCATTC AACACTTTGT AGAGAGGGAA CTTGATAAGA TTGTAGCCAG TTATAGTCCT
AAAATGGCTG TTATTATTGT CATGGATCCC AAAACCGGTG ATATTCTTGC GTTGGGCAAC
CGACCTACCT TTAATCCCAA TAAATGGCGT GAAGTTCCCC AGAGTGTGTG GGACCGCAAC
CCAGCAATAT GGTATAACTA TGAACCCGGT TCAACCTTTA AAATCATTAC GGCATCTTCA
GCCTTAGAGG AGAATGCTGT AAAGACCAGC GATCGGTTTT ATGATCCGGG TTTCTACCAG
GTGGCAGATA GAAAGATACG CTGCTGGAAA GTAGGCGGAC ATGGCAGTCA GAGTTTTGAA
GAAGTGGTAC AGAACTCCTG CAACCCTGGT TTTATTCAAG TGGGACTTGA TTTGGGTAAA
GAAAAGTTCT ATAAATATAT TCGGGCCTAT GGTTTTGGAC AGCCTACAGG CATTGGGTTA
CCTGGTGAGG CAAGGGGAAT TATGATTGGG GAAAAGGATG CCACCAATTT AAATATTGCA
ACCATGTCCA TTGGCCAGTC CATTGCAGTA ACACCGATTC AATTAATAAC GGCAATTAGT
GCAGTGGCTA ATGGTGGGAA ATTAATGAAG CCGCACTTGG TAAAAAGAAT TGAGGATCCA
AAGGGCAAAG TTATTAAAGA GGTTGTCCCC CAAGAAGTAA GGCAAGTAGT TTCGGCAGAA
ACTGCAAAGG TTACCAGCCA ACTGTTGGAA AATGTAGTTT TGAAAGGTAG TGGTAAAAAC
GCCTTTGTGG ACGGCTACCG TGCTGCAGGA AAAACCGGTA CTGCCCAAGT GGTTTCAGAT
CGAGGCGGGT ATGCCAGTGG TAAATACGTT GCATCATTTG CTGGTTTTGC ACCGGTTAAC
GATCCCAAAA TAGCAGTTCT AGTTATGGTT GCAGAGCCCC AAGGCGGGAT GTACTATGGT
AGTCAGGTAG CTGCACCAGT TTTTGCACCT TTGGCCAAGG ATATTCTGCG TTACATGGGG
GTTCCCGAGC AAAAGGATCT GCAAAAGCCA AAGACCAATC CATGGGAAGT GGAAGAAGAG
AAAATTGAAG TGGCAGTACC CAACGTGGTC AACTTACCTT TGAATGAAGC CCAGAAACTT
CTAAGGGAGG CGAGACTGGC CTTTCAGACC AAGGGACAGG GCAAAGTGGT CTATGGTCAG
ATACCGGAAA GCGGTGCATT GGTATTATCA GGTACGACCG TAATTCTTGA TCTCTTGGGA
TCCAATGGAG GTAAAGAAAA AATAGGGGAA CAGGTTTCAG TACCAAACTT AAAGGGCATG
ACTATACGGG AAGCCGGGAA CTTGCTGGAA AGCCTGGGTT TGAAACTAGA TCCAAGTGGA
ACAGGTTTGG CCCATACCCA GAGTCCTGCC AGCGGTGCTA AGTTACCCCG GGGTAGTACC
GTGAAGGTCG AGTTCAAGCC ACCAACGGAA CATAAACCAT AA
|
|---|
| Protein sequence | MKTTNILIRR RITCLFLMAA FFLSLIVFRL VWIQFVRGDE LRQEGIINRM RDVPVEAKRG
SILDQNGNEL VTSISADSIY VIPNHIKKPD EVASQIAPLL GMDIEKVRKI ISQKSRFEWI
KRKVDFETSQ KLKDLKIEGI GFAEESRRYY KQETLAPHIL GFTGTDNQGL MGMEAAYEEE
LKGIPGRIVI EHDAAGREIP QALHQYIPPT QGNNLVLTLD QTIQHFVERE LDKIVASYSP
KMAVIIVMDP KTGDILALGN RPTFNPNKWR EVPQSVWDRN PAIWYNYEPG STFKIITASS
ALEENAVKTS DRFYDPGFYQ VADRKIRCWK VGGHGSQSFE EVVQNSCNPG FIQVGLDLGK
EKFYKYIRAY GFGQPTGIGL PGEARGIMIG EKDATNLNIA TMSIGQSIAV TPIQLITAIS
AVANGGKLMK PHLVKRIEDP KGKVIKEVVP QEVRQVVSAE TAKVTSQLLE NVVLKGSGKN
AFVDGYRAAG KTGTAQVVSD RGGYASGKYV ASFAGFAPVN DPKIAVLVMV AEPQGGMYYG
SQVAAPVFAP LAKDILRYMG VPEQKDLQKP KTNPWEVEEE KIEVAVPNVV NLPLNEAQKL
LREARLAFQT KGQGKVVYGQ IPESGALVLS GTTVILDLLG SNGGKEKIGE QVSVPNLKGM
TIREAGNLLE SLGLKLDPSG TGLAHTQSPA SGAKLPRGST VKVEFKPPTE HKP
|
|---|
| |