Gene Dred_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0649 
Symbol 
ID4955465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp699586 
End bp700818 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content45% 
IMG OID640179823 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_001112013 
Protein GI134298517 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.05288e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAGTC GCTTAATCAA CATTTTAATA GTGTTGCTAC TCCTAACCGT TACTTCACAA 
GCCTGGGCAG GGCAACCCCA AATCACAGGG GAGACCGCCG TTCTGCTGGA TGCTAAATCA
GGTGCAGTTT TGTATGGCAA GGAGGAACAC AAGAGAATGT ATCCTGCCAG CACCACAAAG
GTATTGACAG CCCTAGTGGC GCTGGAACAC GCCCGGATGA CAGATCGGGT GACTATTGGT
CCTAACCCTA GCAAGGCCGG CGGAACCTCC ATCTGGCTGC AAGAGGGAGA ACAATTAGCC
ATGCAGGAAC TTCTTTATGC TCTAATGTTA AACTCTGCCA ATGATGCAGG AGTTGCCATT
GCAGAACATG TGGCAGGTTC GGTAGGAAAA TTCGCAGCCA TGTCCAATGA AAGGGCTAGA
GAACTAGGGG CTAATAACAC TCATTTTGTG AACCCCCATG GGATGCCGAA TAAAGATCAT
TATTCCACTG CCTATGATCT TGCCCTCATA GGCCAAGCGG CATTAAAAAA TAAAGACCTT
AGAAAAATAT TGACAACCAT TCACCATGAA ATACCCAGGG CCGACCCGGA GGCTCAAAAA
TATTTATTTA ATCATAACAA GCTTCTGTGG AGTAAGACCT ATGGCTATAA AGGTGCAACG
GGGCTGAAAA CCGGTTATAC CGTTGAAGCT GGGCAGTGTA TTATTGCTTC TGCAGAGAGA
AATGGCATGG AACTAATAGC AGTGGTGTTG CGTAGTGAAG GCTTTAATTT GTGGACCGAT
GCAGCTAAGT TACTGGATTA TGGTTTTGCA AACTTTACCA ATCGACAGTT GGTGCAGGGT
GGCAAAATCA TGGCAGATGT GCCAGTGAAG TATGGCAAAA GCCATGTAAA ACTGCTAGCC
CAAAATGACT TTTATTATAC CTTTCCCAAA GAGGGAACTG TTGACCTTCA TGTAATCACC
GAGCCCGCAG AAGAAGCCAA AGCACCGGTT GACAAGGGCC AGGTTTTGGG GGCAGTGGTT
ATACAGAATG GTAAAGAGAT TGTTGGAAAG GTTCCACTGG TTGCTCAGGA GACAGTTCAA
CGGGACTGGC AAGCCATAAC TAAAACCTAT TTTAAATGGA TTCTACCACC GAGCTTGCTT
TTACTGTGGA TTCGCCGTAG GCTTTATTTA AAAAGAAAAA GGCAGCAAAG AATGGCTAGG
CGCCAAAAGT ATTATAATTA CCCAATAGAC TAA
 
Protein sequence
MYSRLINILI VLLLLTVTSQ AWAGQPQITG ETAVLLDAKS GAVLYGKEEH KRMYPASTTK 
VLTALVALEH ARMTDRVTIG PNPSKAGGTS IWLQEGEQLA MQELLYALML NSANDAGVAI
AEHVAGSVGK FAAMSNERAR ELGANNTHFV NPHGMPNKDH YSTAYDLALI GQAALKNKDL
RKILTTIHHE IPRADPEAQK YLFNHNKLLW SKTYGYKGAT GLKTGYTVEA GQCIIASAER
NGMELIAVVL RSEGFNLWTD AAKLLDYGFA NFTNRQLVQG GKIMADVPVK YGKSHVKLLA
QNDFYYTFPK EGTVDLHVIT EPAEEAKAPV DKGQVLGAVV IQNGKEIVGK VPLVAQETVQ
RDWQAITKTY FKWILPPSLL LLWIRRRLYL KRKRQQRMAR RQKYYNYPID