| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0617 |
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| Symbol | |
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| ID | 4958390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 662715 |
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| End bp | 663599 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640179792 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001111982 |
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| Protein GI | 134298486 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0495226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGAAA AAGGAACATG GACCGTTAAA AAAGGTCTTG CAGAGATGCT TAAGGGCGGG
GTAATTATGG ATGTTACCAC CCCTGAACAA GCAAAAATCG CTGAAGAGGC CGGTGCTTGT
GCTGTAATGG CTTTAGAAAG AGTACCTGCT GATATTCGGG CTGCTGGTGG AGTGGCTAGG
ATGGCAGACC CCAATATTAT ATTACGCATT ATGGAAGCTG TAACCATTCC AGTTATGGCA
AAGGCGAGAA TTGGACATTT TGTTGAAGCT CAGATTTTAG AAGCTCTTGG TGTTGATTAC
ATTGATGAGA GTGAAGTTTT AACTCCTGCA GATGAAGTTT TCCATATCGA CAAACACCAA
TTTAAAGTAC CCTATGTTTG TGGTGCAAGA AACCTGGGCG AAGCTCTACG TAGGATTGGC
GAAGGTGCTG CTATGATTCG TACCAAGGGT GAACCGGGTA CTGGTAATGT TGTAGAGGCT
GTGCGTCATA TGAGACAAGT TATGAGTGAA ATTCGGATGG TACACAATAT GCCAAAGGAT
GAGCTTATGA CTGCAGCAAA AGAAATGGGA GCTCCCTATG ATCTAGTATT ACAGGTCCAT
GAATTAGGTA AATTACCGGT TGTGAATTTC GCTGCTGGTG GTATTGCAAC TCCTGCGGAC
GCTGCCCTAA TGATGCAACT GGGCTGTGAT GGTATCTTCG TAGGTTCCGG TATTTTCAAA
TCTAATGATC CTGCATCCAG AGCTAAAGCC ATCGTAGCAG CAACCACCCA TTATAATGAT
CCAAAAATAT TAGCAGAAAT ATCAAAGGAT TTAGGAGAGG CAATGCCAGG TATGGAAATC
TCCAGTATTC CTACTGAACA CCGTATGCAA GAAAGAGGAT GGTAA
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| Protein sequence | MAEKGTWTVK KGLAEMLKGG VIMDVTTPEQ AKIAEEAGAC AVMALERVPA DIRAAGGVAR
MADPNIILRI MEAVTIPVMA KARIGHFVEA QILEALGVDY IDESEVLTPA DEVFHIDKHQ
FKVPYVCGAR NLGEALRRIG EGAAMIRTKG EPGTGNVVEA VRHMRQVMSE IRMVHNMPKD
ELMTAAKEMG APYDLVLQVH ELGKLPVVNF AAGGIATPAD AALMMQLGCD GIFVGSGIFK
SNDPASRAKA IVAATTHYND PKILAEISKD LGEAMPGMEI SSIPTEHRMQ ERGW
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