| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0570 |
|---|
| Symbol | |
|---|
| ID | 4957977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 611897 |
|---|
| End bp | 613030 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640179747 |
|---|
| Product | crotonobetainyl-CoA dehydrogenase |
|---|
| Protein accession | YP_001111937 |
|---|
| Protein GI | 134298441 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.741044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTA GACTTACAGA CGAGCAAGAA TTAATAGTTG CGGGAATTCG AGAGTTGATG
GCCAGAGAAA ACTGGGACAG TTACTTTGCG GAATGTGATG CCAACAGCCA GTATCCGGAA
AGATTTGTCA AGGAACTGGC CGATATGGGT ATTGACAGCC TTTTATTACC TGAAGAACAT
GGTGGTTTTG ATGCGGGTTT GGTAACTGTA ACAGCTGTTT GGGAAGAACT TGGAAGATTG
GGTGCACCTA CCTATGTATT ATATCAGTTG CCTGGATTTA ATACGGTATT GCGAGAGGGA
ACCCAAGAAC AAATTGACAA GATTATGGCT TTACGCGGTA CCGGCAAGCA AATGTGGAAT
TCGGCCATTA CTGAACCAGG AGCCGGATCA GATGTTGGCA GTCTTCAGAC CACGTACACT
CGAAAGGACG GGAAAGTATA TTTAAACGGA CATAAATGCT TTATCACAAG TGGAGCAGGG
GTTCCCTATC TAGTGGTTAT GGCTAAGGAC TCCGAAAACT CTAAGATTTT CACAGAGTGG
TTTGTGGACA TGACTAAACC CGGTATTAAA ATAGAGAAGC TTCCAAAGTT GGGTTTAAGA
ATGGATAGCT GCTGCGAAAT TTATTTTGAC AATGTTGAAC TTGAAGAAAA AGATATGTTT
GGTAAAGAAG GCAACGGTTT TCAACGGGTT AAAGAGGAAT TTGATTTTGA ACGCTTCCTG
GTTGGATGCA CCAATTATGG TACTGCCCTG TGCGCTTTTG AAGATGCGGC CAAATATGCC
AACCAGAGAG AGCAATTTGG AGAAAAGATC GGAAGGTATC AATTAATTCA AGAGAAGTTT
GCACATATGG CAATTAAGCT CACCAATATG CGGAATATGT TATATGAAGC TGCATGGAAG
TATGATAATG GAATAATGGG ATCGGGTGAA GCAGCAATGT GTAAATATTA TTGTGCCAAT
GCAGCTTTTG AAGTGGTTGA CCAAGCGATG CAGGTTTTAG GCGGCTATGG TATCGCTGGT
GATCATCGTA TTAGTAGATT TTGGCGGGAT CTTCGTGTGG ATAGAGTTTC TGGAGGAACC
GATGAAATGC AGATTCTTAC CGCCGGCAGA CAGGTACTCA AAAAGTATAG ATAA
|
|---|
| Protein sequence | MDFRLTDEQE LIVAGIRELM ARENWDSYFA ECDANSQYPE RFVKELADMG IDSLLLPEEH
GGFDAGLVTV TAVWEELGRL GAPTYVLYQL PGFNTVLREG TQEQIDKIMA LRGTGKQMWN
SAITEPGAGS DVGSLQTTYT RKDGKVYLNG HKCFITSGAG VPYLVVMAKD SENSKIFTEW
FVDMTKPGIK IEKLPKLGLR MDSCCEIYFD NVELEEKDMF GKEGNGFQRV KEEFDFERFL
VGCTNYGTAL CAFEDAAKYA NQREQFGEKI GRYQLIQEKF AHMAIKLTNM RNMLYEAAWK
YDNGIMGSGE AAMCKYYCAN AAFEVVDQAM QVLGGYGIAG DHRISRFWRD LRVDRVSGGT
DEMQILTAGR QVLKKYR
|
|---|
| |