| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0569 |
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| Symbol | |
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| ID | 4958490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 610190 |
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| End bp | 611713 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640179746 |
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| Product | L-carnitine/gamma-butyrobetaine antiporter |
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| Protein accession | YP_001111936 |
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| Protein GI | 134298440 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGAAC AGAAGAAACT GAAGATCGAT CATATAATAT TTTGGCCGCC ATTATTATTA
ATATCCATTG TTTGCGCATT AATTATTAAG GATCCCGTGA GAGCAAATGA GATATCGAAT
AAAGCTCTGA CCTGGACCAC AGACAAACTT GGTTGGGCCT TTGAATGGTA CGTAGTTATT
CTTTTCGTTA TTTCTATGTA TCTAATCTTT GGTAAGTATA AAGATAAAAA GTTTGGCGAG
GGTGAGCCAG ATTTTAAAAC CAGTACATGG TTAGGAATGA TTTTCACTTC AACCTCAAGT
GCTGCGCTTA TTTATTGGGC AACCATTGAA TGGTACTACT ACATGCAAAC CCCTCCCTTT
GGGGCTGAAC CATTTTCGGT TGAAGCGGCA CAGTGGGGGT CAGCTTATGG TATGTACCAC
TGGGGGCTTA TCCCGTCCGC TATGTATGTT GTAGTTGGAA CAGCAATCGG TTATAACTTC
TTTGTTAAAA AAAGGAATGT TGTTAAGCCC AGTAGTGTGT GTGGAATTTT AGGCAAACAT
AAAGACGGAT TGACGGGTAA AGTTATCGAC ATCCTTTATA TTATCGGAAT GGTTGCAGGA
GTAGGTACAT CGTTAGGTTT AGGAACTCCC CTTGTTGCTG AACTACTCTC CAAGATTTTC
GGAATAGAGC ATACGTTATC CTTGGATGGT TGGATTCTCG TTGCTTGGAT TGCTTTATTC
TCCACAAGTG TTTATTTGGG ATTACAGAAA GGGATTAAAG TACTTAGCGA TATAAGAGTG
TATTTAGCTT TTGGAGTTAT TATTTTTGTC GCTGTATTTG GTCCTACGTC ATATATTCTA
AACGGTTTTA CTGATGCCCT TGGAACGATG CTACAGAATA TTGTAAGAAT GTCCCTCTAT
ACAGATCCCT ATGGGAAGTC TGGGTTCCCA CAAGGTTGGA CTATATTTTA CTGGGCTTGG
TTCCTAAACT GTGTTCTCAC GTATTCAATT TATCTTGTAC GAATTTCCAA AGGGAGAACG
GTTCGTGAAT TCGCAGCTGC AGTATTAGGG GCTATTGTTC TGGGAGAAAT GGTTTTCTTC
GCGGTGTTTA CTAACTATGC TATGTTTGCA CATTATGAAG GACTAGTGGA CCTGGCTAAG
ATAATGGAAC AATCTGGTGC AGCTCGGGCC ATTGTTGAAA TTTGGGCTAC CCTGCCTTTA
AGTATAGTGC TTTTACCTGT ACTACTCATT TACTCTTTCG TCTCTACAGC GACGTTCATT
AACGGTGTTG CTTATACTTT GGCAATGGTT ACGACTAAAG AAATCACAGA GAATGATGAA
CCCTCAAGGT TAAATCGGGT GGTATGGGCA TTGCTTCTCG GTTCATTAGC AATTTCTCTT
CTGATGTTAG GCGGACTAAA GCCTTTACAA ACGGCCTCAG TTTTAGGCGG CTTACCTATG
ATGATTGTTT GTATTATTAT CCCAATTTCG TTTTTCAAAG AAGTTAAAAA TGGCTGGGTA
TTCGCAAATA AAGATAAAAA TTAA
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| Protein sequence | MSEQKKLKID HIIFWPPLLL ISIVCALIIK DPVRANEISN KALTWTTDKL GWAFEWYVVI
LFVISMYLIF GKYKDKKFGE GEPDFKTSTW LGMIFTSTSS AALIYWATIE WYYYMQTPPF
GAEPFSVEAA QWGSAYGMYH WGLIPSAMYV VVGTAIGYNF FVKKRNVVKP SSVCGILGKH
KDGLTGKVID ILYIIGMVAG VGTSLGLGTP LVAELLSKIF GIEHTLSLDG WILVAWIALF
STSVYLGLQK GIKVLSDIRV YLAFGVIIFV AVFGPTSYIL NGFTDALGTM LQNIVRMSLY
TDPYGKSGFP QGWTIFYWAW FLNCVLTYSI YLVRISKGRT VREFAAAVLG AIVLGEMVFF
AVFTNYAMFA HYEGLVDLAK IMEQSGAARA IVEIWATLPL SIVLLPVLLI YSFVSTATFI
NGVAYTLAMV TTKEITENDE PSRLNRVVWA LLLGSLAISL LMLGGLKPLQ TASVLGGLPM
MIVCIIIPIS FFKEVKNGWV FANKDKN
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