| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0530 |
|---|
| Symbol | |
|---|
| ID | 4957526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 572635 |
|---|
| End bp | 573630 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640179709 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_001111899 |
|---|
| Protein GI | 134298403 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTATGCC AAGGCAAGAG TGATTTTGAC CACATTGAAC CCTTTCGAGA AGATAATTTC
TTTGCAATCT CGTTAAACAT CAAAGAGACA CCGTCAAGCC CAACCCTTCG CCAACGATTA
GATATGGTTG CTAAAGATAA GCAATGGAAT AATATCCTGT TGGAAGAATC TGCGGGGCTA
ATCAAAAAAA CAAATGCACC TCTAACCCCA GTGTACCTGG GTCAAGAAAA TAGAGCTTAT
CTTCCACTAG ATATTGATGT GTCTCCCTTT GATAACTCCA ACACCAAAAA AGAAGGGGTC
TCCCGCACCT ACAAAGGCAC CGATGGTTAC GCTCCCATCT TTGCATATCT AGCAAAGGAA
GGTTATTGCG TAAATACTGA GCTACGCCAA GGGAGTGAAC ATTGCCAAAA GAACACCTCA
GAATTCGTTG CTGAAAGCAT TCGCTATGCC CGAAAAATTA CCCAGTTGCC TTTGCTTTTA
AGGATGGACT CAGGCAATGA CAGCGCTAGT AATATTGAAA TTTGCTTAAA TGATGATACT
AAGGCTGATT TCATTATTAA GCGAAACCTT CGCAAAGAAA CCCCTGAAGG GTGGCTACTA
TTGGCAAAGA ACAATAAAGA TATTTACTGC CAGGAACGTG AAGGTAAAAA AGTCTACTAT
GGTTCCATGA TGAAATACAA AAAGGAGCTG AAAAGAGAAA TCAGGGTAGT TTACAAAATT
ACCGAAAGAA CCTTTGGTAA AGATGGCCAG ATATTTCTCG TACCCCAGGT GGAGGCAGAA
ACCTATTGGA CCTCATTGCC AGACCCTCCA CATGTAATCG AAAGACTATA CCACGAACAT
GGCACCAGTG AGCAGTTTCA CAGCGAACTT AAGACAGACC TGGATTTAGA AAGACTGCCC
TCTGGCAAAT TTGACACTAA CAACCTAATA CTACATTTTG GAGTAGTGGC CTACAATCTG
TTGCGCATGA TAGGACAATC AACAACTGTA GATTAG
|
|---|
| Protein sequence | MLCQGKSDFD HIEPFREDNF FAISLNIKET PSSPTLRQRL DMVAKDKQWN NILLEESAGL
IKKTNAPLTP VYLGQENRAY LPLDIDVSPF DNSNTKKEGV SRTYKGTDGY APIFAYLAKE
GYCVNTELRQ GSEHCQKNTS EFVAESIRYA RKITQLPLLL RMDSGNDSAS NIEICLNDDT
KADFIIKRNL RKETPEGWLL LAKNNKDIYC QEREGKKVYY GSMMKYKKEL KREIRVVYKI
TERTFGKDGQ IFLVPQVEAE TYWTSLPDPP HVIERLYHEH GTSEQFHSEL KTDLDLERLP
SGKFDTNNLI LHFGVVAYNL LRMIGQSTTV D
|
|---|
| |