Gene Dred_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0487 
Symbol 
ID4956912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp529013 
End bp529474 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content44% 
IMG OID640179658 
Productpyruvoyl-dependent arginine decarboxylase 
Protein accessionYP_001111858 
Protein GI134298362 
COG category[S] Function unknown 
COG ID[COG1945] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00286] arginine decarboxylase, pyruvoyl-dependent 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0124659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACCGA CTCCTAAGAA ATATTTTGTT ACCGCTGCTT CATCCGAAGG AAAAAGTAAA 
CTTACGGCAT TTGACAATGC ACTACTAAAA GCACGCATCG GCAATGTAAA TCTCTTACGA 
GTGTCCAGCA TTCTGCCACC GGGCTGTCAA GAGGACCCCG GCATGGTATT GCCTCCTGGT 
TCTCTAGTTC CAACTGCCTA CGGATACATT GTCAGTAATG TACCAGGTGA GATTATTTCT 
GCCTGTGTGG GAGTGGGTAT TAATTCCAAT GATTCCTTCG GAGTTATTAT GGAATTCTCG 
GGTAAATGCA GTAAGGAAGA GGCCGAACAA AACATCACCA ATATGGTGAA GGAAGCATTT 
GAAACCCGAG GGATGGAACT AAAAGATATT AAGATTGCTT CCGCAGAACA TAAGGTTGAA 
AAAATTGGTT GTGCCCTGGC AGCAGTTCCC CTTTGGTATT AG
 
Protein sequence
MLPTPKKYFV TAASSEGKSK LTAFDNALLK ARIGNVNLLR VSSILPPGCQ EDPGMVLPPG 
SLVPTAYGYI VSNVPGEIIS ACVGVGINSN DSFGVIMEFS GKCSKEEAEQ NITNMVKEAF 
ETRGMELKDI KIASAEHKVE KIGCALAAVP LWY