| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0484 |
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| Symbol | |
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| ID | 4956900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 525720 |
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| End bp | 527291 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640179655 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001111855 |
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| Protein GI | 134298359 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.036637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA AATTATTCCA ATTGGCCTTT CTGTTTCTAT TCTTAAGCTT TTTTTCAGTT
GTTGTAAACT ATGATAAAGG GGCTAGTCCC ACCTTTTTTA AAAAAGAAAT TCCTCAACAA
ATTGATATAA CCTATGCCCT TGCAGAACCA TTAAAAAGTC TAGATCCTGC TGAAGCAAAT
AATATGTCTG AAGCTAAGGT TTTGTCAAAT ATCTTCGAAG GACTTGTCCG TTATCAATCA
GGAACCTCTG AAATAGAACC TTGTCTGGCT ACCCATTGGG AACTTTCTAA AGATGGCTGC
AGTTGGGTTT TTCATTTAAG GAAAAATGTT ACTTTCCACG ACGGTACGCC TTTTAATGCA
CAGGCTGTGA AAATAAGTAT TGAGCGGCAA CTGCCTCCAC AAAAAAAAGA CACCATGTCC
TATGGCAGTT TTACCTTTGG TATGTTGAAA AAAATTGAAG TGATTGATAA TTATACCATA
AATTTTTTGT TGACAACACC TTATTCACCC TTTTTAAGAA ATCTTGCCAT GCCTTGGGCG
GCACCCATTA TAAGCCCCTC TTCCCTTAAG AATCTGGGCA ATGACAAAAT GCTCCTGGCA
GGTACGGGCC CCTTTTATCT GGCAGATTGG CGTAACGGTG CTCCTATACT TTTAGCCAAT
GAAAAATATT GGGATAAAAA GCCCTTTATT AAATCCTTAT CCTTTCTTCC CCAGTCCCCC
CAGCAGAGAC TAGCATCGCT TAATAAAGGA ACTGTGGAAA TGGCTGATGT TTCCGGTCTA
CCCGGGGATA CCATAAAGGC ACAAAATGTT ATAACAACCA GCCAATCGTC AGCATCTCTC
AGTTATTTGG GAATGTTTAA CAATCGGCCC CCTTTTAACA ACGATAAGGT CCGTAGGGCC
CTTTGCATGG CCATAGATAC CCGGGAGTTG ACAAAGAACA TCTTTGGCGA TCAATCACTG
GCTGCCAATA GCATTCTGCC ACCAGAAATA CTTGGTTATA ACAAAAATTT ACGGCCTTAT
TTTGGCGGTC CGGAAAAAGC AAAAGCCCTG TTAAGTCAAT ATGGTTATAC AGAGGGATTG
GATATAACAT TAATCACTTA TAACACACCC CGTCCCTACA ACCCTTTAGG TGGAACTGAA
TTAGCTACGA CCATCAAAAA GCAGTTGGCT AAAGCTGGTA TTCGGGTCAA TGTAAAGGTT
TATCCCTGGC ATGAATTTAA ATCGGCCCTG CGCAAACAGG AAGGAGATGC TTTTTTATTT
GGCTGGGTCA GCGATAACTT AGACCCGGAT AATTTTCTTT ATACACTACT GGCATCGGAT
GAAATTACTA AAACAAACCT CACCCATTAT AAAAACAGTG AAGTAGATCG TTTAATCAGT
GCCGCACAAA GAGAACAAGA TGAAAAAATA CGAAAAAGGT TATATTATCA TGCCCAGCAG
ATTATGCTTC AGGATACTCC CATGGTCTTT CTAAACTATG GTCAAGATAA AATTGCTCTT
ACCAAAAATA TTCAAAACTT GAAATTAAAC CCCTTTGGTA TTCCTCTCTT TGCCAAGGCT
TATATTCAGT AA
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| Protein sequence | MKNKLFQLAF LFLFLSFFSV VVNYDKGASP TFFKKEIPQQ IDITYALAEP LKSLDPAEAN
NMSEAKVLSN IFEGLVRYQS GTSEIEPCLA THWELSKDGC SWVFHLRKNV TFHDGTPFNA
QAVKISIERQ LPPQKKDTMS YGSFTFGMLK KIEVIDNYTI NFLLTTPYSP FLRNLAMPWA
APIISPSSLK NLGNDKMLLA GTGPFYLADW RNGAPILLAN EKYWDKKPFI KSLSFLPQSP
QQRLASLNKG TVEMADVSGL PGDTIKAQNV ITTSQSSASL SYLGMFNNRP PFNNDKVRRA
LCMAIDTREL TKNIFGDQSL AANSILPPEI LGYNKNLRPY FGGPEKAKAL LSQYGYTEGL
DITLITYNTP RPYNPLGGTE LATTIKKQLA KAGIRVNVKV YPWHEFKSAL RKQEGDAFLF
GWVSDNLDPD NFLYTLLASD EITKTNLTHY KNSEVDRLIS AAQREQDEKI RKRLYYHAQQ
IMLQDTPMVF LNYGQDKIAL TKNIQNLKLN PFGIPLFAKA YIQ
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