Gene Dred_0472 details

Gene Information

• Locus tag: Dred_0472
• ID: 4956748
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 514310
• End bp: 516136
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640179643
• Product: GTP-binding protein TypA
• Protein accession: YP_001111843
• Protein GI: 134298347
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTATAC AAGATATTAG GAACATTGCT ATCATCGCCC ACGTCGACCA TGGCAAAACC 
ACCCTGGTTG ACGGGATGTT AAAACAAAGT GGAATCTTCC GGGCAAATCA AATTGTACAA 
GAACGGGTTA TGGATTCCAA TGACCTGGAA AAGGAGCGGG GAATTACAAT CCTTGCCAAA 
AATACCTCGG TTCGCTATCA GGGCTACAAA ATTAATATTG TGGATACCCC AGGCCACTCG 
GATTTTGGTG GAGAAGTGGA ACGGGTATTA AAAATGGTGG ATGGTGTATT ACTGCTGGTG 
GATGCATCCG AAGGCCCTCT GCCCCAGACC CGATTTGTTT TACGGAAAGC ACTGGAACTT 
AATCTAGTGC CTGTGGTGGT GGTGAATAAA ATTGACCGCC CGGATGCCAG AATCAGTGAA 
GTGGTGGATG AAATTTATGA GTTGTTCTTT GAACTGGGAG CCAATGATGA GCAACTGGAG 
TTTCCGGTGG TTTATGCAGT TGCCAGGGAT GGCATGGCTA CAATGGATCC CGATGAACCG 
GGAACAGATT TAAAGCCCCT CTTTGAAACC ATTGTTAATC ATTTCCCGGC ACCCCAGGGG 
GACCCAGAGG CACCTCTGCA GCTATTGGTA AACAATACTG AATATGATAC CTATGTGGGT 
CGTATTGCTA TTGGTAGAAT ATCCCAGGGA ACCATTGCTG CGGGACAAAC CGTTACGGTT 
ATTGATCATG ATGGCAATAC CAGAAACTTT CGGACTGGCC GAGTATATGT CTACGAAGGC 
CTGGAACGGG TAGAGGTACC AAAGGCAACC TGTGGGGAAA TTGTGGTTGT TTCCGGATTG 
GAAGATATTA AAATCGGTGA AACCATTGCA GACAAAGATA ACCCGGTGGC CATACCGCCC 
ATCAAGGTGG ACGAGCCCAC CCTGGAAATG ACCTTTATGG TTAACGACAG TCCCTTTGCG 
GGCCAAGAAG GGGAGCACAT TACTTCCCGT AAGCTGAAGG CCAGACTGTA CAAAGAGATG 
GAGAAAAATG TGAGCCTGCG GGTACAGGAC ACTGAATCGC CGGATGTTTG GAAAGTGGCG 
GGACGGGGTG AATTACACCT ATCCATTCTA ATAGAAACCA TGCGCCGGGA AGGTTTTGAA 
CTGCAGGTTT CCAAACCAGA GGTTATCTAT AAGCGTGGCG AAAATGGCGA ACTACTGGAA 
CCAATGGAAA TGTTACTGGT GGATATACCC GAAGACAAAA TGGGACCAGT TATGGAGATG 
CTGGGTAACC GGAAGGGCGA AATGATTAAC ATGGGTCCCA ATGGTCCGGG ACAGCTGCGT 
TTGGAATTTA AAGTTCCAGC CCGGGGCTTG ATTGGTTTCC GTTCTCAACT TTTATCCGAG 
ACCAGAGGTC TAGCCATTAT GAACCACACC TATCATGGCT ATGAACCCTT TAAAGGGGAA 
ATCCGCCGTC GTTACCAGGG TGTACTGATT GCCTTTGAAA CCGGCGACGC AACTTTTTAC 
GGGCTGAATG CAGCCCAAGA CCGAGGTACT CTCTTTGTGG TACCAGGCAC CAAGGTCTAT 
GAAGGTATGG TGGTCGGGGA ACACGTTCGG GAACAAGATA TCGAAGTAAA TATCTGTAAG 
AAAAAGCAGT TAACAAACCA CCGCTCCAGT ACAGCTGAGG CTACAGTGAA ACTGGAGGAA 
GCCAGAATCA TGAGTTTGGA AGAGGCTTTG GAATATCTCA GTGATGATGA GCTGCTGGAA 
ATTACCCCGA AGAGTCTGAG GATTCGTAAG AAGTTCTTGG AAAAGAATGA AAGAGCCCGG 
GCCAAGAAGG CGGCTCAACA GGCTTAA 

 

Protein sequence

MIIQDIRNIA IIAHVDHGKT TLVDGMLKQS GIFRANQIVQ ERVMDSNDLE KERGITILAK 
NTSVRYQGYK INIVDTPGHS DFGGEVERVL KMVDGVLLLV DASEGPLPQT RFVLRKALEL 
NLVPVVVVNK IDRPDARISE VVDEIYELFF ELGANDEQLE FPVVYAVARD GMATMDPDEP 
GTDLKPLFET IVNHFPAPQG DPEAPLQLLV NNTEYDTYVG RIAIGRISQG TIAAGQTVTV 
IDHDGNTRNF RTGRVYVYEG LERVEVPKAT CGEIVVVSGL EDIKIGETIA DKDNPVAIPP 
IKVDEPTLEM TFMVNDSPFA GQEGEHITSR KLKARLYKEM EKNVSLRVQD TESPDVWKVA 
GRGELHLSIL IETMRREGFE LQVSKPEVIY KRGENGELLE PMEMLLVDIP EDKMGPVMEM 
LGNRKGEMIN MGPNGPGQLR LEFKVPARGL IGFRSQLLSE TRGLAIMNHT YHGYEPFKGE 
IRRRYQGVLI AFETGDATFY GLNAAQDRGT LFVVPGTKVY EGMVVGEHVR EQDIEVNICK 
KKQLTNHRSS TAEATVKLEE ARIMSLEEAL EYLSDDELLE ITPKSLRIRK KFLEKNERAR 
AKKAAQQA