Gene Dred_0454 details

Gene Information

• Locus tag: Dred_0454
• ID: 4956517
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 496258
• End bp: 496911
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640179624
• Product: secretion protein HlyD
• Protein accession: YP_001111825
• Protein GI: 134298329
• COG category: [V] Defense mechanisms
• COG ID: [COG1566] Multidrug resistance efflux pump

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA AAAAAATATA CCTGGTCATG CTGGTGATGG TGATTGCCCT AGCCGCAGTT 
TCTTATTATT ACTGGTACCA GAATACACAC TACGTTGCCA CAGAAGACGC CAGGGTGGAT 
GGGAATATTA TTAAAGTCAG CCCTCAGTTA GCAGGGCAGA TTATCGAATT ACCCATTGAA 
GAGGATCAGT ATCTAGAAAA GGGTGAGTTT GTGGGCCGTC TGTCCGATGT AACCTTACAA 
CTAGGTGCCA ACCTCGATTT AACTGTAATC AAAGCACCCA TAAGCGGCAC TATCATTAAA 
AAGATTGCCC ATGTGGGTGA GATGGCAGCC CCGGGTGTAG CAATGGCAGT CATGGCCGAC 
TTAAAGGACC TCTACATTAC TGCCAATATT GAGGAAAACA AATTGAACAA AGTAAAAGTG 
GGTCAGATAG TAGAGTACAC CATTGATACT TTTCCCGGTG TTCAATTTAA AGGAAAGGTT 
TTGACCATTG GCAATGCGGC TAATTCTCTC TTTTCACTAT TACCTCAGCA AAATTCCGGC 
AATACCTTTA CCAAGGTAAC CCAACGAATC CCCGTGAAGA TCAGCATCGA GGATTACCAC 
AACAAGCGTC TACTGCCTGG AATGAACGCA GTGATAAAAA TTCATATTCA ATAG 

 

Protein sequence

MKKKKIYLVM LVMVIALAAV SYYYWYQNTH YVATEDARVD GNIIKVSPQL AGQIIELPIE 
EDQYLEKGEF VGRLSDVTLQ LGANLDLTVI KAPISGTIIK KIAHVGEMAA PGVAMAVMAD 
LKDLYITANI EENKLNKVKV GQIVEYTIDT FPGVQFKGKV LTIGNAANSL FSLLPQQNSG 
NTFTKVTQRI PVKISIEDYH NKRLLPGMNA VIKIHIQ