| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0449 |
|---|
| Symbol | |
|---|
| ID | 4956434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 491535 |
|---|
| End bp | 492989 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640179619 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_001111820 |
|---|
| Protein GI | 134298324 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGTAT CACAACTTAT TACCACAAAT CAACTTGAAA CTATGTCCCG TCAACAACGA
CGTAACTTGG AACGCAAATA CCAAAAGAAA TTAAATTCCC TACAACACCA GACTAGCAAA
AGCGATCTTC CGCTTAGGTT TGACAATTCG TCTGTAACCG CTTATGGAAG TTTTGGTATA
CTAGAGGCTT TTAAGAAGGC TGTTGATTTA CCCGGTATGC TTAAACGGGT CTCTCTTAAG
CGGCATCATA ACTGTAAATA CTCTGATACA GAGTTGTTGG ATACGATCAT TGATGCCCTC
TCATTGGGAT TATTGCGGTT TTCTCATATG AATGCTCTAC AAACTGATCC TGGGTACCAG
AAAATTAAGG AAGTAACACA AGTGCCTGAC GAGAGCACCT TGCGAAACTT TGTATCTCTT
ATATGTGAGC AGGAGGCATT AGACCAATTG TCTCTGGTGA ATCAGGAACT GTTATCCTTA
AAGGCCAAAT GCGACCAATC CCGCGAAGTC TGGCTGGATA TTGACGACAG TGTCCTCACT
GTTTTCGGTA AACAGGAGGG ATCAAAAGTC GGTTACAATC CCCGGTATCA CGGGCGACCT
TCCTACAAAG TAAAAGTAGC GTTTATCTCC GGAACTTGCG AACTGGTCAA TGCTGGCTTA
TATAGTGGGA ATGTCGCCAG TAACGGCCAA TTTATGGAGT TTCTTAAAGA GACACTAGAG
ATCTTAGCCA ACCAGAATAT CCTCGTAAAA GGCATACGCA TGGATAAAGG TTTTTTTGAT
GAAGATAACT TCGCCTACCT GGAAGAACAG GGCATTGAGT ATATTTGTAA GGCTAAGCTC
ACCAGTAATA TGAAAAAAGT CATTAAATAC CTTGATGATC AGGAACGATG GCAGCCTTTG
AGCAACCACT ACGCTGCAGC AGAAATTACT CTTCCATTGC CTAAATGGTC CAAAGCCCGC
AGGTTTGTAT TTATCCGTGA AACTCAAGAA CCAAAGGTAT CTGGTGAGCA ACTTAACTTT
GACCTAAAGA CATTTGATTA CCAAGTGATA ATTACTTCTA GCGACGAGTA CAACCCAGAG
GAGGTATGGC ACCAATACAA TAAGCGTTGC AATATTGAAA ACAAAATTGA TGAACTCAAG
GTTGGTCTAG GCTTTGAAAA AATGAGTCAG GCAGAGTTGG ATCGAAATAT AGCCTTTATG
TGGCTCAAAG TATTATCGTA TAACATTCTC AACTGGTTTC GCTTGGTCTT ATTGGATGGC
AAAGACAGTC GTGCTGAAGT GCCAACTATC CGCCGCAAAA TACTGAATGT ACCTGGGAAC
ATTGTAGGCA ACGACCGTTA CCGCCATATA AAGTTAGCCC CTAATCCCTG GCTACAAAAG
GTTTTGAAAA ATGCCAAGGA AAAACTACAA GAATTTCTCT GCACACAGGC ATGGGTTGCA
GTAAGTTCCG GTTAA
|
|---|
| Protein sequence | MMVSQLITTN QLETMSRQQR RNLERKYQKK LNSLQHQTSK SDLPLRFDNS SVTAYGSFGI
LEAFKKAVDL PGMLKRVSLK RHHNCKYSDT ELLDTIIDAL SLGLLRFSHM NALQTDPGYQ
KIKEVTQVPD ESTLRNFVSL ICEQEALDQL SLVNQELLSL KAKCDQSREV WLDIDDSVLT
VFGKQEGSKV GYNPRYHGRP SYKVKVAFIS GTCELVNAGL YSGNVASNGQ FMEFLKETLE
ILANQNILVK GIRMDKGFFD EDNFAYLEEQ GIEYICKAKL TSNMKKVIKY LDDQERWQPL
SNHYAAAEIT LPLPKWSKAR RFVFIRETQE PKVSGEQLNF DLKTFDYQVI ITSSDEYNPE
EVWHQYNKRC NIENKIDELK VGLGFEKMSQ AELDRNIAFM WLKVLSYNIL NWFRLVLLDG
KDSRAEVPTI RRKILNVPGN IVGNDRYRHI KLAPNPWLQK VLKNAKEKLQ EFLCTQAWVA
VSSG
|
|---|
| |