| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0422 |
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| Symbol | |
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| ID | 4955568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 461402 |
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| End bp | 462052 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640179592 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001111793 |
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| Protein GI | 134298297 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000113561 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAA TTAGAGACCC CTTTAGCGGC TTGAGCCATT TGACCGGTGC CTTTTTATCG
GTAGTTGGTT TAATATTATT GGTCTATAAT GCTGTTGTTT ATGGTAAACC CTTACATATT
GTCTCCTTTT CAATTTTCGG AGCCAGTCTT ATATTGCTTT ACACTGCCAG TGCCTTGTAT
CATTTATTGC CCCTTTCCCC CAAGGGAATA CTCCTTTTAC GTCGTATCGA TCATATGATG
ATATTCGTAC TAATCGCTGG TACCTATACT CCTGTTTGCC TCATTCCTCT ACGCGGTGGG
TGGGGATACT CTCTGCTGGT GGGAGTTTGG GCACTGGCCA TCGTTGGGAT TATTATAAAA
CTCCTTTGGA TGGAAGCACC GCGCTGGTTT TCCACACTGA TCTATGTTGT TATGGGCTGG
TTAATTGTTA TTGCATTTTG GCCTTTAATA CAAACAGTTA CTACCGGGGG TATTGTTTGG
ATGGTATTAG GAGGAGCTTT TTATACGGTG GGAGCAGTCT TTTATGGTAC TAAATGGCCA
CCTAACCTAG TGCCTGGTTG GTTTGGTTTT CATGAGGTGT TTCACCTCTT TGTGATGGCT
GGTAGTTTCA GTCACTTTTG GTTAATGATG AAATACATTA TGTATATTTA A
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| Protein sequence | MAKIRDPFSG LSHLTGAFLS VVGLILLVYN AVVYGKPLHI VSFSIFGASL ILLYTASALY
HLLPLSPKGI LLLRRIDHMM IFVLIAGTYT PVCLIPLRGG WGYSLLVGVW ALAIVGIIIK
LLWMEAPRWF STLIYVVMGW LIVIAFWPLI QTVTTGGIVW MVLGGAFYTV GAVFYGTKWP
PNLVPGWFGF HEVFHLFVMA GSFSHFWLMM KYIMYI
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