Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0415 |
Symbol | |
ID | 4955734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 456296 |
End bp | 457180 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640179586 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_001111787 |
Protein GI | 134298291 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00249205 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAGAAC AGGGTACATG GACACTTAAA AAAGGACTGG CTGAAATGTT AAAAGGTGGA GTTATTATGG ATGTAACAAC ACCGGAACAA GCTAGAATAG CAGAAAATGC CGGGGCTTGT GCAGTAATGG CTTTAGAGAG AGTTCCTGCA GATATTAGAG CTGCAGGTGG AGTAGCTAGA ATGGCAGATC CTACTGTAGT ATTACGAATT ATGGATGCTG TTACAATTCC TGTAATGGCT AAGGCAAGAA TTGGTCATTT TGTGGAAGCA CAGATTTTAG AAGGTTTAGG AGTAGATTAT ATTGACGAAA GTGAAGTTTT AACTCCTGCT GATGAATTAT TTCATATTAA TAAAAATACA TTTAAGGTTC CCTTTGTATG TGGTTGCCGT AACTTAGGAG AAGCATTGCG TCGTATTGGC GAAGGTGCTG CCATGATTAG AACTAAAGGA GAGCCAGGTA CTGGAAACGT GGTTGAGGCA GTAAGACATT TTCGCCAAGT AAACAGTGAA ATTAAGAAAA TAATGAATTT ACCTGAAGAA GAGTTAATGA CTGTTGCCAA AGAAATAGGT GCACCTTTTG AATTAGTAAA AGTAGTACAT CAGACGGGTA AATTACCTGT GGTTAATTTT GCTGCGGGTG GAATTGCAAC TCCTGCGGAT GCTGCGCTTA TGATGCAATT AGGTGTTGAT GGCGTATTTG TGGGTTCTGG CATATTTAAG TCTGGAGACC CAATGAAAAG AGCTAAGGCT ATTGTAGCTG CTACAACCTA TTATAATGAT CCCCAGGTTT TGGCTGAAGT GTCTAAGGAT TTAGGGGAAC CTATGGTAGG TATTGAGATT CACAATATTA AAGCTGAAGA AAGAATGCAA GATAGAGGTT GGTAG
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Protein sequence | MQEQGTWTLK KGLAEMLKGG VIMDVTTPEQ ARIAENAGAC AVMALERVPA DIRAAGGVAR MADPTVVLRI MDAVTIPVMA KARIGHFVEA QILEGLGVDY IDESEVLTPA DELFHINKNT FKVPFVCGCR NLGEALRRIG EGAAMIRTKG EPGTGNVVEA VRHFRQVNSE IKKIMNLPEE ELMTVAKEIG APFELVKVVH QTGKLPVVNF AAGGIATPAD AALMMQLGVD GVFVGSGIFK SGDPMKRAKA IVAATTYYND PQVLAEVSKD LGEPMVGIEI HNIKAEERMQ DRGW
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