Gene Dred_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0402 
Symbol 
ID4957673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp437819 
End bp438961 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content44% 
IMG OID640179571 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001111775 
Protein GI134298279 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA GATTAAACGA TGAACAGCAA ATGTTTAGAG ATACCATTCG TAAATTTGCT 
CAGAAAGAAA TCGCTCCCAT CGCAGCTCAG ACTGACAGTA CCCATCAGTT CCCTCTGGAG
ACTTTAAAAA AATTAGCTGA TATGGGTTTA ATGGGTCTTC CCATTCCAGA AGAATATGGT
GGTGCTGGCT CTGATTATGT AACCTTTGCT ATCCTAGTTG AGGAAATTGC CAAGGTCTGC
GCATCAACCG CAGTTATTCT ATCGGTTCAT ACTGGTTTAG GTTGTATGTC TACCTATATG
TTTGGTAACG AAGAACAAAA GGAAAGATAT CTGAAGCCAT TGTGCGAAGG TAAAATGCTT
GGCGCATTTG CCCTTACAGA ACCCCAAGCC GGTTCAGATG CTGCTGCTTT AAAATGCACG
GCAGTACGGA AAGGTGACAA ATACATCCTG AACGGTAGCA AGATTTTCAT TACCAATGGT
GGTTACGCAG ATATGTATGT TACCTTTGTA CGGACAGACC CAAGCACCAA GAATTACAAC
GGAGTTACCT GTTTGATCGT GGATAAAGAT ACACCTGGCT TGGTCATTGG TAAACCCGAA
GAAAAAATGG GCTTGAACGG ATCTGCCACA GTAACTTTGA CCTTTGAAGA CGCTGAGGTA
CCAGTAGAAA ACCGTTTGCT GGAGGAAGGC AAGGGCTTCA ATGTGGCCAT GGGCCTTCTG
AACGGCGGAC GTATTACCAT TGGTGCCCAG GGCTTAGGTA TTGCCCAAGG CGCTCTTGAT
TTAACCATTC CTTATGTAAA AGGTCGTGAA CAATTCGGCA AGCCTCTTTC TGCCCAACAA
GGAATCCAGT TTATGCTGGC TGATATGGCA ACAGAAATTG ATGCATCACG CCTGTTGATT
TATCGTGCTG CATGGCTAAA GAGCAACGGG TTAGAACATG CAATGGAAGC TTCCATGGCC
AAACGTTTTG CAACCGACAC AGCCATGAGA GTAACCACTG ACTGTGTACA ATTGTTTGGT
GGCTATGGCT ACTGCAAAGA GTACCAAATA GAGCGGTATA TGCGGGATGC CAAAATTACT
CAAATCTATG AAGGTGCCAA CCAAATTCAA AGATTAGTAA TTGCCAAGCA GCTTCTTAAA
TAA
 
Protein sequence
MDFRLNDEQQ MFRDTIRKFA QKEIAPIAAQ TDSTHQFPLE TLKKLADMGL MGLPIPEEYG 
GAGSDYVTFA ILVEEIAKVC ASTAVILSVH TGLGCMSTYM FGNEEQKERY LKPLCEGKML
GAFALTEPQA GSDAAALKCT AVRKGDKYIL NGSKIFITNG GYADMYVTFV RTDPSTKNYN
GVTCLIVDKD TPGLVIGKPE EKMGLNGSAT VTLTFEDAEV PVENRLLEEG KGFNVAMGLL
NGGRITIGAQ GLGIAQGALD LTIPYVKGRE QFGKPLSAQQ GIQFMLADMA TEIDASRLLI
YRAAWLKSNG LEHAMEASMA KRFATDTAMR VTTDCVQLFG GYGYCKEYQI ERYMRDAKIT
QIYEGANQIQ RLVIAKQLLK