| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0399 |
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| Symbol | |
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| ID | 4957979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 432994 |
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| End bp | 435081 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640179568 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001111772 |
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| Protein GI | 134298276 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGTTC GAGAAATCAA TACATTGCAT TCCATTGCTT TGAGCCCGGA GCAAACTGTC
CAGGAAGTAG TGGGAATTTT CCTAAAACAT CAGGTGGACG GAGCACCCGT TATCGATGCA
GAAGGGAAGA TCATGGGCCT TTTTACCAAA GATCAGATTT ACCGACTAGT AAATGAGGGC
TTAAATGTGA ATACTTCTGT AGCAGAGTTG ATGATCCCGG CAGACAAAAT CGGCCACCTA
GATGATGAGT TGGAAGATCT TTTAAATGAG GATTTTGAAT GGTTGCCCAT TGTTGATGAA
GATCGAGTTA CTAGCATGAT CACCAGAAGC AATCTCTCAA AGGTGTTTTT TGACTTTTAT
CGGGCTATTT CCTGTGAGCT TGAAACCATT ATTAACTCCA CGATAAACTT AATTGTATCA
GTTGATAAAG AAGGAAAAAT TAACGTATTT AATAAGGCAG CAGAGAAATT TCTTGGTAAG
GAAGCTCAAG AGGTAAAGGG TAAGAATATT GCTGAAATTT TTCCAAACAG TGGACTGGCT
GAGGTTGTAC GTACGGGGAA TGTAGAACTT TTGCAGAAGG TCAAGTTGAA TGATAATGAT
TATATCTCTA ACCGTTCACC AATCATAAAA GATAATAAGG TAATTGGGGC TGTTGCGGTA
CTTCAGTGTA TTTCCGAAAT GGAGAAAGTA TCAAGGGAGT TAGAGAGTGT TAAAGAATTA
AATGAGGAAT TACAGGCAAT TATTGAATCC TCCTTTGATG GACTTTATAT TACAGATGGG
AAGGGGTTAA CTCTTCGTTT AAATAAGGCG TATGAGAGGA TAACTGGCCT AAAGGCCCAA
GAATTCCTGG GGCGGTATGC TGAGGATATA ATGAAGGAAG GTGTGGTTTC TGAGTCGGTA
GCTGTTCTGG CCTTAAAGCG AAGGGAAACG GTCTCGATTA TTCAAGAATA CAGGGCGGGC
AAAACAACTT TGGCCACTGG CAACCCGGTC TTTGATAAAA ACGGTAACAT CTTTAGAGTT
GTTTGCAACG TTAGGGATAT TACAGAACTC AATCAATTAA ATAAAGAACT AGAACAGGCC
CGGGGCTTAA GTCAACATTA TCAAAGTCAA TTGCGTACTA TGAGCTATTT TGGCTCAGAC
AGAATTGTGA TTAAATCGGA AAAAATGAAA GATCTTTTAG GACTCATTAT TCGATTAGCC
GGGGTTGATT CTACCATTTT AATCACTGGA GAATCAGGAA CAGGTAAAGA ATTAATTGCG
GAAACCTTAT ATATTAATAG TAATCGGCGG GATGGGCCAT TTATCAAATT AAATTGTGGG
GCAATTCCAG AAAACTTACT GGAGTCAGAA CTTTTTGGTT ATGAATCTGG TGCCTTTACA
GGGGCCAGTA AAGAAGGTAA AGCTGGATAT TTTGAGCTAG CTAACGGGGG AACTCTTTTT
CTTGACGAGA TTGGGGAATT GCCATTAAAT CTTCAGGTTA AACTCTTGCG GGTTTTACAG
AGCAGGGAAA TTGTCCGTGT AGGCGGGAAA AAACCGCTAA AAATTAATAT TCGTATTTTG
GCTGCAACCA ACCGTAATCT AAAGGACATG GTTGACAAAA AAGAATTTCG CGAGGATTTG
TATTACCGTT TAAATGTTGT GCCTGTTAAT GTGCCGCCTC TTAGAGAACG GAAGGAAGAA
ATTACATCCT TTGTCACCCA TTTCATGCTG ATATTCAATA GAAAATATAA GGTTAATAAA
AGGATTACAC CAGAAGTGGT TGATCTTTTC CTACGGTATG ACTGGCCCGG TAATATCAGG
GAACTAGAGA ACCTTATTGA GAGATTGATA GTAATTACTA CAGGGAATTT ATTAACAATA
AATGATTTGC CAGCCAATAT TAAGGGAAAC AATCCAGACA ATTTAGCCAG TGTACAAGTT
TCTTGTCTTA TGCCCCTAAA AGATGCGGTC GAAAGTGTTG AGAAACAGGT ATTGGAACGA
GCCTATGCAG AGTTCCGTAC TATTCGTCAG ATGGCTGAGA CATTAAAAGT ATCTGCTGCT
ACTGTTGTAA GAAAGGCAGC CAAATATGGA ATTACCCAAG AACTATGA
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| Protein sequence | MKVREINTLH SIALSPEQTV QEVVGIFLKH QVDGAPVIDA EGKIMGLFTK DQIYRLVNEG
LNVNTSVAEL MIPADKIGHL DDELEDLLNE DFEWLPIVDE DRVTSMITRS NLSKVFFDFY
RAISCELETI INSTINLIVS VDKEGKINVF NKAAEKFLGK EAQEVKGKNI AEIFPNSGLA
EVVRTGNVEL LQKVKLNDND YISNRSPIIK DNKVIGAVAV LQCISEMEKV SRELESVKEL
NEELQAIIES SFDGLYITDG KGLTLRLNKA YERITGLKAQ EFLGRYAEDI MKEGVVSESV
AVLALKRRET VSIIQEYRAG KTTLATGNPV FDKNGNIFRV VCNVRDITEL NQLNKELEQA
RGLSQHYQSQ LRTMSYFGSD RIVIKSEKMK DLLGLIIRLA GVDSTILITG ESGTGKELIA
ETLYINSNRR DGPFIKLNCG AIPENLLESE LFGYESGAFT GASKEGKAGY FELANGGTLF
LDEIGELPLN LQVKLLRVLQ SREIVRVGGK KPLKINIRIL AATNRNLKDM VDKKEFREDL
YYRLNVVPVN VPPLRERKEE ITSFVTHFML IFNRKYKVNK RITPEVVDLF LRYDWPGNIR
ELENLIERLI VITTGNLLTI NDLPANIKGN NPDNLASVQV SCLMPLKDAV ESVEKQVLER
AYAEFRTIRQ MAETLKVSAA TVVRKAAKYG ITQEL
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