| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0395 |
|---|
| Symbol | |
|---|
| ID | 4957894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 428088 |
|---|
| End bp | 429197 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640179564 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001111768 |
|---|
| Protein GI | 134298272 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3535] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAAGCAAACA GGATTTGTAT GATATATTAT ATGGGTGCAC GATTCTTGGC
ACCGGTGGCG GTGGAGCTTT GCAAGAAGGT CTGACTATGA TTGACGACGC TCTGGACAGG
GGCAAGGAAT TTATCCTGGT GGATCTGTCT GAAGTGCCTG ATGATGCCTA TATTGCCACA
CCCTATATGT GTGGTGCCAT CTCTCCCCTT ACTGAAGAAG AAGAGCGTAA GTATGTAGGG
CTGGCTGTGT TGGATGAGGA ACCTTCCCTA AGGGCCTTTA GGGCAATGGA AGAATATATG
GGCAAGGAGT TTTACGGTGT GGTCTCCACG GAATTAGGTG GTGGCAATAC GGCTAAGGCC
TTTTATGTAG GGGCTATGGC AGGAAAATAT ATTATTGATG CAGATCCCGC CGGTCGATCC
GTTCCGGAGT TACAGCATTC TACCTACTAT ATTAACAATT TACCCATCGC ACCAATGGCT
GTGGCCAATG AATTTGGTGA TGTAGTTATC CTCAAAGAAG TGGCGAATGA CCTTCGGGCA
GAAGCTTTAG TTCGGGCCAT GGCAGTGGTC AGCAAAAACT CCATTGGTGT GGTGGATCAC
CCTGCTTCTG CTAAAGACCT AAGAAAGGCT GTAATTCCCG GGGCCATTAC CTATGCTTTG
AAATTGGGTC AAGCCTACCG AGAAGCAAGG GAGGAAAACA ATGACCTGGC AGAGGCATTG
TGCAAAGCTG GCAAGGGCTA CCTGCTCTTT AAGGGAACCG TTAAAGATTT TGGTTGGGAT
ACCATAGATG GTTTCACAGT GGGGGAGACC TATTTGGAAG GTACAGGTGA TTATACAGGC
TCCACCTATA AAATATGGTA TAAAAACGAA CACATTATTG CCTGGCGAAA TGGGGAAGTG
GATGTAACCG TGCCGGACCT CATCTGCATG GTTTGCGAGG ATAACAAGGA ACCTGTTACC
AATCCCAATT ATCAGATAGG CATGAATGTT GCGGTCTTTG CTCTGCCCGC TCCGGCGGAG
TGGCGGACAG AGAAGGGACT GGACTGTTTT GGACCCAAGC ATTTTGGCTA TAATATTGAG
TATTTGCCGG TGGAGAAAAA AATTGGCTAA
|
|---|
| Protein sequence | MKKLSKQDLY DILYGCTILG TGGGGALQEG LTMIDDALDR GKEFILVDLS EVPDDAYIAT
PYMCGAISPL TEEEERKYVG LAVLDEEPSL RAFRAMEEYM GKEFYGVVST ELGGGNTAKA
FYVGAMAGKY IIDADPAGRS VPELQHSTYY INNLPIAPMA VANEFGDVVI LKEVANDLRA
EALVRAMAVV SKNSIGVVDH PASAKDLRKA VIPGAITYAL KLGQAYREAR EENNDLAEAL
CKAGKGYLLF KGTVKDFGWD TIDGFTVGET YLEGTGDYTG STYKIWYKNE HIIAWRNGEV
DVTVPDLICM VCEDNKEPVT NPNYQIGMNV AVFALPAPAE WRTEKGLDCF GPKHFGYNIE
YLPVEKKIG
|
|---|
| |